Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0061 ATGGACAATGAGGAAATCCCATCAGTACCTTCTACCCCTGCAACACCAGGTACTCCTGGTGCTCCTCTTTTTGGTGGCTTCAGGTCTGAGAGAACTGGAAATGGTAGAAAGAACTCACTCCTCAAGAATTTAAAATGTTTTAGTGTTGAAGATTGGACTTTGGAAGATGGAGCCTTACCTAAAGTCACTTGCTCTTTACCTCCCCCTCCTGTCCCTCTTGCCAAAAAGGTTGGAGCTGAGTTTATAGGCACATACATTCTAATGTTTGCTGGAATAGCCACTGCAATTGTGAACCAAAAGATACATAACTCAGAAACACTAATTGGATGTGCTGGAGCAACTGGACTTGCTGTTATGATCATAATATTATCAACCGGTCACATTTCTGGTGCTCATCTTAATCCGGCCGTCACGATTTCATTTGCTGCATTAAAACACTTCCCCTGGAAAAATGTACCTTTGTATATTGCTGCACAAGTTTTGGCATCAATATGTGCTTCATTTACTTTGAAAGGGGTTTTTCATCCATTTATGAGTGGTGGTGTCACGGTTCCTTCAGTTGAATATGGCCAAGCTTTTGCTTTAGAGTTTATTATCAGCTTTAATCTCATGTTTGTTGTCACTGCAGTGGCCACCGACACAAGAGCTGTGGGAGAACTTGCGGGAATCGCGGTTGGAGCCACTGTCATGCTCAACATACTCATTGCTGGGCCTGCAACTGGAGCTTCAATGAATCCAGTAAGAACATTAGGACCAGCAATTGCTGCAAACAACTACAAAGGCATATGGTTATATCTCATAGCCCCTATTCTTGGTGCCCTTGGTGGGGCAGGTGCTTACACTGTTGTTAAGCTTCCTGATGAAGAGTTTAACTCTGAGGTAAAAGCCTCTTCTGCCCCTGGAAGTTTCAGAAGATGA 918 0.4346 MDNEEIPSVPSTPATPGTPGAPLFGGFRSERTGNGRKNSLLKNLKCFSVEDWTLEDGALPKVTCSLPPPPVPLAKKVGAEFIGTYILMFAGIATAIVNQKIHNSETLIGCAGATGLAVMIIILSTGHISGAHLNPAVTISFAALKHFPWKNVPLYIAAQVLASICASFTLKGVFHPFMSGGVTVPSVEYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGASMNPVRTLGPAIAANNYKGIWLYLIAPILGALGGAGAYTVVKLPDEEFNSEVKASSAPGSFRR* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0061 305 SUPERFAMILY Aquaporin-like 72 292 IPR023271 -
Mtr4g0061 305 CDD MIP 75 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g0061 305 PRINTS Major intrinsic protein family signature 75 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g0061 305 PRINTS Major intrinsic protein family signature 114 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g0061 305 PRINTS Major intrinsic protein family signature 151 170 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g0061 305 PRINTS Major intrinsic protein family signature 195 213 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g0061 305 PRINTS Major intrinsic protein family signature 226 248 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g0061 305 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g0061 305 Pfam Major intrinsic protein 73 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr4g0061 305 ProSitePatterns MIP family signature. 132 140 IPR022357 -
Mtr4g0061 305 PANTHER BNAA02G36290D PROTEIN 3 291 - -
Mtr4g0061 305 Gene3D Glycerol uptake facilitator protein. 70 296 IPR023271 -
Mtr4g0061 305 PANTHER AQUAPORIN NIP2-1 3 291 IPR034294 -
Mtr4g0061 305 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0061 Mtr-Chr4 738046 743050 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0061 1 305 Major Intrinsic Protein MIP AT1G80760 76.129 2.49e-162 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0061 K09874 - gmx:100798410 442.195