Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0035 ATGAGGCCGATTCAGCTTCCACCACCAACCTCCACCGGTTCAGCCACCGCTTCCGGTTCACCAAACAACAACAACAGCCGCCCTCAACGCCGCCGCAGAGATCACCTAACTCTACCGCTTCCTCAGCGTGACACTAACCTCGCTGTTCCACTTCCGCTGCCACCATCTGGTGGCAGCGGTGGTGGAGGAAACGGAAGCGGTAGCGGAAGCGGAGGAGCAAGTCAACAGCTAGTGATTCCGTTTTCCGAGCTAGAAAGATTGAACCGGATCGGAAGTGGAAGTGGAGGAACGGTTTACAAAGTAGTTCACAGAATCAACGGTCGTGCTTATGCTTTGAAGGTGATATACGGACATCACGAGGAATCAGTTCGTCGTCAGATCCATCGTGAAATCCAGATCTTGCGTGATGTTGATGATGTTAACGTCGTCAAGTGTCATGAGATGTACGATCACAACGCTGAGATTCAGGTTTTGCTTGAATACATGGACGGTGGATCTCTCGAAGGGAAACATATTCCGCAGGAAAATCAACTTGCTGACGTGGCACGTCAGATCCTCCGTGGACTCGCGTATCTCCACCGTCGTCACATCGTTCATCGTGATATCAAACCGTCGAATCTCTTGATAAATTCACGGAAACAGGTGAAGATTGCTGATTTTGGTGTAGGAAGAATTCTGAATCAAACGATGGATCCGTGTAATTCATCGGTAGGAACAATTGCTTACATGTCACCGGAGAGGATAAACACCGATATCAACGATGGACAATATGATGCATACGCAGGTGATATATGGAGTTTAGGTGTGAGTATATTGGAGTTTTATATGGGAAGGTTTCCATTTGCGGTTGGTAGACAAGGTGATTGGGCGAGTTTGATGTGTGCAATTTGTATGTCACAACCACCAGAAGCTCCAACGACTGCTTCACCGGAGTTCAGGGATTTCGTTTCTAGGTGTTTGCAGAGAGATCCGTCGAGGAGATGGACTGCTTCGAGGTTGCTTTCACATCCTTTTCTTGTGAGAAATGGTTCTAATCATAATCAGAGTCCTCCAAATATGCATCAGTTACTTCCTCCACCACCAAGATCACAATCTTCTTAG 1101 0.4759 MRPIQLPPPTSTGSATASGSPNNNNSRPQRRRRDHLTLPLPQRDTNLAVPLPLPPSGGSGGGGNGSGSGSGGASQQLVIPFSELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDVNVVKCHEMYDHNAEIQVLLEYMDGGSLEGKHIPQENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHPFLVRNGSNHNQSPPNMHQLLPPPPRSQSS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0035 366 MobiDBLite consensus disorder prediction 7 26 - -
Mtr4g0035 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 28 359 - -
Mtr4g0035 366 CDD PKc_MAPKK_plant_like 82 345 - -
Mtr4g0035 366 ProSiteProfiles Protein kinase domain profile. 84 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0035 366 SUPERFAMILY Protein kinase-like (PK-like) 81 359 IPR011009 -
Mtr4g0035 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Mtr4g0035 366 MobiDBLite consensus disorder prediction 340 366 - -
Mtr4g0035 366 SMART serkin_6 84 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0035 366 Gene3D Transferase(Phosphotransferase) domain 1 165 354 - -
Mtr4g0035 366 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Mtr4g0035 366 Gene3D Phosphorylase Kinase; domain 1 70 163 - -
Mtr4g0035 366 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 28 359 - -
Mtr4g0035 366 MobiDBLite consensus disorder prediction 1 74 - -
Mtr4g0035 366 Pfam Protein kinase domain 85 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0035 Mtr-Chr4 407922 409494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0035 1 355 MAP Kinase Kinase Gene Family AT1G51660 69.337 1.89e-169 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Mtr4g0035 Pkinase 3.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0035 K13413 - gmx:100818488 574.318