Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0034 ATGACTATCCAAACAATGGAACAAGAGTTGATTTTCAAGTCTAAGCTTCCTGATATTTACATTCCCAAACACCTTCCTCTTCATTCATATTGCTTTGAAAATCTATCAAAATATGGTTCACGTCCTTGCCTCATCAATGCTCCAACTGCTGAAATTTACACCTACTATGATGTCCAACTCACCGCGCAAAAAGTCGCCTCCGGTCTCAACAAACTTGGCATCCAACAGGGGGATGTCATCATGGTTCTTCTCCCTAATTGCCCGGAATTTGTGTTCGCCTTTCTCGGTGCTTCTTTTCGCGGCGCCATAATGACTGCCGCCAATCCCTTCTTCACTTCAGCTGAGATTGCTAAACAAGCAAAAGCTTCCAATACTAAGTTGCTTGTAACACAAGCTTGTTACTATGACAAAGTTAAGGATTTGGAAAATGTGAAGCTGGTTTTCGTGGATTCTTCCCCGGAGGAGGACAATCACATGCATTTCAGTGAGCTGATTCAGGCTGATCAGAATGAAATGGAAGAGGTAAAAGTGAACATCAAACCCGATGATGTGGTTGCATTGCCATATTCATCTGGAACAACCGGTCTACCTAAAGGTGTTATGCTAACACACAAAGGGTTGGTGACAAGCATAGCACAACAAGTTGATGGAGAAAATCCAAATCTATATTATCACAGTGAAGATGTCATACTATGTGTTCTTCCCATGTTTCATATTTACTCACTCAACTCAGTTTTGCTTTGTGGTTTGAGAGCTAAAGCTTCAATATTATTAATGCCAAAGTTTGACATTAATGCATTTTTTGGCCTTGTTACTAAATACAAAGTCACCATTGCTCCTGTTGTGCCACCAATTGTTTTGGCTATTGCTAAGTCACCTGAACTTGATAAATATGACCTTTCATCCATTAGGGTATTGAAATCTGGTGGGGCCCCACTTGGTAAAGAACTTGAGGATACTGTTAGGGCCAAATTTCCCAAAGCTAAATTGGGACAGGGTTATGGGATGACTGAAGCAGGTCCAGTTTTAACAATGTGTTTATCATTTGCTAAAGAGCCAATAGATGTGAAATCAGGTGCATGTGGAACAGTTGTTAGAAATGCTGAGATGAAGATTGTTGATCCTCAAAATGACTCCTCTTTGCCTAGAAATCAACCTGGTGAAATTTGTATTAGAGGCGACCAAATCATGAAAGGTTATCTAAACAACCCGGAAGCAACGAGGGAAACAATAGACAAGGAAGGTTGGTTGCATACTGGTGACATTGGATTCATTGACGATGATGATGAGTTGTTCATAGTTGATAGACTTAAAGAATTGATTAAATACAAAGGTTTTCAAGTTGCTCCAGCTGAACTTGAAGCCATTATTCTCTCACATCCTCAAATTTCCGATGTCGCTGTCGTCCCAATGTTAGATGAAGCAGCTGGTGAGGTGCCAGTAGCATTTGTTGTAAGATCAAATGGAAGTATTGACACAACTGAGGATGACATTAAGAAGTTCGTCTCCAAACAGGTTGTGTTTTACAAAAGAATAAACAGAGTATTCTTCATTGATGCCATTCCCAAGTCACCTTCAGGCAAAATATTAAGAAAGGACCTAAGGGCTAAGCTTGCAGCTGGTGTTCCAAATTAA 1635 0.4024 MTIQTMEQELIFKSKLPDIYIPKHLPLHSYCFENLSKYGSRPCLINAPTAEIYTYYDVQLTAQKVASGLNKLGIQQGDVIMVLLPNCPEFVFAFLGASFRGAIMTAANPFFTSAEIAKQAKASNTKLLVTQACYYDKVKDLENVKLVFVDSSPEEDNHMHFSELIQADQNEMEEVKVNIKPDDVVALPYSSGTTGLPKGVMLTHKGLVTSIAQQVDGENPNLYYHSEDVILCVLPMFHIYSLNSVLLCGLRAKASILLMPKFDINAFFGLVTKYKVTIAPVVPPIVLAIAKSPELDKYDLSSIRVLKSGGAPLGKELEDTVRAKFPKAKLGQGYGMTEAGPVLTMCLSFAKEPIDVKSGACGTVVRNAEMKIVDPQNDSSLPRNQPGEICIRGDQIMKGYLNNPEATRETIDKEGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAELEAIILSHPQISDVAVVPMLDEAAGEVPVAFVVRSNGSIDTTEDDIKKFVSKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGVPN* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0034 544 CDD 4CL 21 534 - -
Mtr4g0034 544 Pfam AMP-binding enzyme 33 443 IPR000873 -
Mtr4g0034 544 Pfam AMP-binding enzyme C-terminal domain 452 528 IPR025110 -
Mtr4g0034 544 Gene3D - 438 540 IPR045851 -
Mtr4g0034 544 SUPERFAMILY Acetyl-CoA synthetase-like 16 540 - -
Mtr4g0034 544 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Mtr4g0034 544 Gene3D - 5 437 IPR042099 -
Mtr4g0034 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 539 - -
Mtr4g0034 544 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 6 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0034 Mtr-Chr4 375243 378875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0034 9 506 Monolignol Biosynthesis Gene Families AT1G51680 71.683 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0034 K01904 - gmx:547944 883.634