Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0019 ATGGATTCAAAGAAGTCTAACAAGATAACAGATATTGTTAGGCTTCAACAAATCCTGAAGAAATGGAAAAAGGTTGCTGCAAATGCTTCCAACAACTCATCAAGTAGTAGCAGCAGTGGCAATAAAGGAATCAAGTTTTTGAAAAGAACTTTGTCATTCACAGATGTTTCTATTTCCATTTCCAATTCCAATTCCAATGTGGACATAGTTCCAAAAGGTTTTCTAGCTGTTTGTGTTGGGAAAGAGCTCAAGAGATTCATTATTCCAATGGATTACCTTAAACATCAAGCATTTGAGGTGTTGCTACAAGAAGCTGAAGAGGAGTTTGGTTTCCAACAAGAGGGTGTGCTCAAAATTCCATGTCAAGTATCAATGTTTGAGAAAATATTGAAGGTTGTGGAAGATAAAAAAGAAGCCTTAAACTTGCATGAGTTTGGATTTGGTGGAGAGAATTGTGATGTTACTCCCACTCATCATGCTCAAGTTTGTAGATGA 495 0.3657 MDSKKSNKITDIVRLQQILKKWKKVAANASNNSSSSSSSGNKGIKFLKRTLSFTDVSISISNSNSNVDIVPKGFLAVCVGKELKRFIIPMDYLKHQAFEVLLQEAEEEFGFQQEGVLKIPCQVSMFEKILKVVEDKKEALNLHEFGFGGENCDVTPTHHAQVCR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0019 164 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 156 IPR003676 GO:0009733
Mtr4g0019 164 Coils Coil 12 32 - -
Mtr4g0019 164 PANTHER OSJNBA0060N03.10 PROTEIN 5 156 - -
Mtr4g0019 164 Pfam Auxin responsive protein 20 132 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0019 Mtr-Chr4 215179 215885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0019 1 163 Calmodulin-binding Proteins AT2G24400 53.448 5.65e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0019 K14488 - gmx:100782489 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0019 4 215179 215885 Mtr4g0019 4 215179 215885 ECH