Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0018 ATGGAAGCCAGAGAATCTTCGGATGGCATCGGAAACCGGAAGATGAGCAAGGTTCCGAAAGGATACGTTGCCGTTTATGTTGGACCGGAGTTTAGAAGGTTTGTGATTCCAATAAGGTTCTTGAGCATGGCTGAGGTGAAGGAGTTGATGGATGATATAGCTGAGGAGTTTGGTTGTGATTATCACGCTGATGGTGCTCTTCATATTCCATGTGATGAAGATTATTTTCGCAATGTTTTGATTAATTGTTTTGCAACACAAGGCAGGGTATCTTCTAAGAATCATAAGATCAAACTTGGTAATAAGAATGCCTTGATTTACAGTCATTAA 330 0.403 MEARESSDGIGNRKMSKVPKGYVAVYVGPEFRRFVIPIRFLSMAEVKELMDDIAEEFGCDYHADGALHIPCDEDYFRNVLINCFATQGRVSSKNHKIKLGNKNALIYSH* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0018 109 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 14 95 IPR003676 GO:0009733
Mtr4g0018 109 Pfam Auxin responsive protein 12 80 IPR003676 GO:0009733
Mtr4g0018 109 PANTHER OS02G0143300 PROTEIN 14 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0018 Mtr-Chr4 213458 213787 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0018 18 80 Calmodulin-binding Proteins AT3G43120 53.968 2.07e-17 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0018 K14488 - mtr:MTR_4g005310 226.868