Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0013 ATGGAACTTCAATGGTTATGGATGTTTGCTGCCACTTTGTTGACATGCTACATTTTTGTTAGCAAAGTTATGAGGAACTTGAATGGATGGTATTATGATCTTAAATTTAAAAACAAACAATATCCACTGCCTCCCGGTGATATGGGATGGCCTTTTATTGGAAACCTATGGACCTTCTTCAAATATTTCTCGTCTGGTCGCGGTGAAACGTTCATCAACAACATTGTTCACAAATTTGGACGAATTGGTATTTACAAGACTCATCTGTATGGAAGTCCAAGCATCATTGTCATTGCACCTGCTATATGCAAGAAAGTCTTAATTGATGAAGTGACCTTTAAAATTGGTTATCCAAAAGCTGCCACTGAACTAGCAAAAAGTAAGTTACTAAATAGTGAAAATGGACGTTTTAAACGACTAGTCGCGGCTCCTATCATTGGTCGGAATGTATTAGAAATGTACTTAGAGCGTATTGAGGATATTGTGATCAACAAGCTAGAAGAATTGTCTAGCATGAAACACCCTGTTGAGTTCCTTATGGAGATGAGAAAAGCTTCTTTTGAATTCGTCATTCACATTTTCTTAGGCTCTTGTGATCAAAGTAACGTAAAGAAATTTGGAGATTTGTTTAATGTTATGTGTATTGCATTGTTCTCTTTGGTGCCCATAAATGTACCTGGTTTTGCTTACAACAAAGCATTAAAGGCACGTATGAAGTTTGTCAAGATAGTGCAATATATTATTTATGAAAGGAGAATGACGATAAAAAATGGACAAAATGGGAAAAATAATGATTTGTTAGACATTATTTTGCAAATCAAAGACGAAAGTGGTGAAAAATTTGAGGATAAGGACATTATTGACTTACTGATAACGTTTCTATTTGGTGCTCATGAAACAATCGCAACTACCATTATGTGGTCAGTTATGTATCTTACACAAAATCCACTTTGTTTGAAGAAAGCTAAGGAAGAGCAAGAAGAGATCATGAAAGCAAGACCACCCTCGCAAAAACGATTAAGTATTGATGAAATTAAACAAATGGTTTATCTTTCTCAGGTCGTTGATGAAACAATACGCCATGTCTCTAACTTTTCAACTTTTCGAGAAGCAACAACTGATGTGAACATAAATGGTTATTTCATACCAAAAGGATGGAAAGTATTAGTTTGGCTAAGCGCTCTTCATATGGATCCAGAGCATCACTCAAATCCAGAAGAATTCAATCCAACGAGATGGGATGATTATAACCCCACAACAGGATCCTTTATTCCTTTTGGAGTAGGTCGGAGGCTTTGTCCGGGAAGAGACCTAGCGAGATATAAAATATCTATATTTTTGCACTATTTTGTCCTAAATTACAGGTTGGAGCGAATAAATTCGGAATGTCCGCTTACTAGTTTCCCACAACCTAAACCAATAGACAACTGTTTGGCTAGGATAATAAAGCTCTCTAATTCTTAA 1464 0.36 MELQWLWMFAATLLTCYIFVSKVMRNLNGWYYDLKFKNKQYPLPPGDMGWPFIGNLWTFFKYFSSGRGETFINNIVHKFGRIGIYKTHLYGSPSIIVIAPAICKKVLIDEVTFKIGYPKAATELAKSKLLNSENGRFKRLVAAPIIGRNVLEMYLERIEDIVINKLEELSSMKHPVEFLMEMRKASFEFVIHIFLGSCDQSNVKKFGDLFNVMCIALFSLVPINVPGFAYNKALKARMKFVKIVQYIIYERRMTIKNGQNGKNNDLLDIILQIKDESGEKFEDKDIIDLLITFLFGAHETIATTIMWSVMYLTQNPLCLKKAKEEQEEIMKARPPSQKRLSIDEIKQMVYLSQVVDETIRHVSNFSTFREATTDVNINGYFIPKGWKVLVWLSALHMDPEHHSNPEEFNPTRWDDYNPTTGSFIPFGVGRRLCPGRDLARYKISIFLHYFVLNYRLERINSECPLTSFPQPKPIDNCLARIIKLSNS* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0013 487 Gene3D Cytochrome P450 34 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g0013 487 PANTHER CYTOCHROME P450 26 22 462 - -
Mtr4g0013 487 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g0013 487 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g0013 487 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g0013 487 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g0013 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Mtr4g0013 487 PANTHER CYTOCHROME P450 88D6 22 462 - -
Mtr4g0013 487 SUPERFAMILY Cytochrome P450 39 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g0013 487 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g0013 487 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g0013 487 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g0013 487 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr4g0013 487 Pfam Cytochrome P450 44 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0013 Mtr-Chr4 157817 173567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0013 13 483 Cytochrome P450 AT2G32440 42.977 1.81e-148 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0013 K04123 K17875 ag:BAG68929 632.098