Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0005 ATGCATATCAACCACAACCTCTCGTGGTTGTGGATTATTGTTTTGATCTCAACCGCCTCAGTACAATGCAAAACCTCCTCCCAAGATGTTTCAGCCCTTAATGTAATGTACACCAGCTTGAATTCTCCTTCTCAACTCTCTGGCTGGAAATCAAGCGGAGGTGATCCTTGTGGTGAAAATTGGGAAGGAATCAAATGCTCTGGCTCATCTGTCACAGAAATAAATTTATCTGATCTGGGACTTAGTGGATCGTTGGGCTACCAGTTATCACAGTTAACATCTGTTACCGACTTTGATTTGAGCAACAACAATTTCAAGGGTGACATACCGTATCAACTCCCTCCAAATGCTCGTAACGTAGATCTTTCTAAGAATGCGTTCACTGGAAACATACCTTACTCCATTGGTCAGATGAAAGAACTAACTTCTCTAAATCTTGCACATAATAAGCTCAATAATCAGCTGGGGGATATGTTTACGACCCTCACTAAACTCAAACAATTGGATGTATCATTCAATTCACTGTCAGGAGAACTGCCTCAGAGTTTGAAATCAGCAACGAGCCTCAAGAAGATATATCTGCAAAACAATCAATTATCTGGTTCAATAAATGTCCTTGCCTACCCTCCACTTGACGATGTGAATGTTGAGAACAACAAATTTACTGGTTGGATTCCTGAGGAGTTAAAGGATATAAATAGTTTGCAAACTGGAGGAAACTCTTGGAAAACTGGGCCAGCACCACCTCCTCCTCCCGGTACACCTCCTATCAAGCATCATTCCGAGGAAAAGGAAGGAAAATCATCAAATTCTCTTGTTACTGGATTGATTATAGCTGGCATTGCCTTTGGTGCGCTGGTCGTCATCATACTCATTGCTGCTCTTTTTAAAAGAAAGTCATCATATGCTTCTTCACGTTTTATTGATGAAGAGAGGCGTAGCCAGCACAGATCCTTTACACCCCTTGCATCTCAGGAGTTGACTAAAGATTTAGGTGGTAATGACACAGAATACAAAGGATTTAAGGCAATGGATTCGACTTCAATTGACATAATGGCTTTACAAAAAAATCCATCAGTTAGTGTTAGGTCATCAGTCTCTGATTGTGTCCAAAACTTTAATGACAATGAGTTTGCAAATCGTCTAAATTCTAGAAAAAGCGCATCAATCCGCTGTACTGCTTTTTCATTGGGGGAGTTGCAAACTGGTACTGCTAACTTTGCTTCAGGCCGACTTCTTGGTGAAGGATCCATTGGACCTGTTTATCGTGCCAAATATGCTGATGGAAAGGTACTGGCTGTAAAAAAATTAAACCCTTCACTTATTGATGAGGGTTCTCCTGAGGAATTCACTCAGATTCTATCAAACATGTGCAAACTTCGTCATCCAAATATTGCGGAGCTTGTTGGCTATTGTTCAGAACAGGGGCACATGTTAGTATATGAGTATTTCAGAAATGGTTCTCTCCACGACTTTTTACACTTATCAGATGACTTCAGCAAACCACTAACTTGGAACACCAGAGTCAGAATCGCATTGGGCACTGCTCGGGCTGTTGAGTACCTACATGAAGCTTGTTCTCCGCCATTACTTCACAAGAATATCAAATCCGCCAATATTTTGCTTGACACAGATTTGAATCCCCGTCTCTCAGACTATGGTTTGGCATCCTTCCACCAGCGTACTAGCCAAAATCTTGGGGCAGGATATAATGCACCAGAATGCACAAAACCATCAGCCTATACCCTGAAGAGCGATGTATACAGTTTTGGGGTAGTGATGCTCGAACTTTTTACAGGTCGAATGCCTTTAGACAGTTCAAAGCCAAAATCAGAGCAAAGCCTCGTTCGTTGGGCTACGCCACAGCTTCGTGACATAAACGCTGTGGAAAAGATGGTAGACCCTGCATTGCGGGGACTTTACCCTCCTAAATCACTCTTTCGATTTGCTGACATCGTCGCCCTTTGTGTTCAGTCTGAGCCCGAATTTCGGCCATCTGCATCAGAGGTGGTTCAGGCATTGGTGCGATTAGTTCAACGTTCAAGTTTGAAAATGAGAGAGGATCTTGGTGCAATTGGTCGGACAGATGATTATGATGATTGA 2103 0.4232 MHINHNLSWLWIIVLISTASVQCKTSSQDVSALNVMYTSLNSPSQLSGWKSSGGDPCGENWEGIKCSGSSVTEINLSDLGLSGSLGYQLSQLTSVTDFDLSNNNFKGDIPYQLPPNARNVDLSKNAFTGNIPYSIGQMKELTSLNLAHNKLNNQLGDMFTTLTKLKQLDVSFNSLSGELPQSLKSATSLKKIYLQNNQLSGSINVLAYPPLDDVNVENNKFTGWIPEELKDINSLQTGGNSWKTGPAPPPPPGTPPIKHHSEEKEGKSSNSLVTGLIIAGIAFGALVVIILIAALFKRKSSYASSRFIDEERRSQHRSFTPLASQELTKDLGGNDTEYKGFKAMDSTSIDIMALQKNPSVSVRSSVSDCVQNFNDNEFANRLNSRKSASIRCTAFSLGELQTGTANFASGRLLGEGSIGPVYRAKYADGKVLAVKKLNPSLIDEGSPEEFTQILSNMCKLRHPNIAELVGYCSEQGHMLVYEYFRNGSLHDFLHLSDDFSKPLTWNTRVRIALGTARAVEYLHEACSPPLLHKNIKSANILLDTDLNPRLSDYGLASFHQRTSQNLGAGYNAPECTKPSAYTLKSDVYSFGVVMLELFTGRMPLDSSKPKSEQSLVRWATPQLRDINAVEKMVDPALRGLYPPKSLFRFADIVALCVQSEPEFRPSASEVVQALVRLVQRSSLKMREDLGAIGRTDDYDD* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0005 700 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Mtr4g0005 700 SUPERFAMILY Protein kinase-like (PK-like) 386 674 IPR011009 -
Mtr4g0005 700 SUPERFAMILY L domain-like 24 236 - -
Mtr4g0005 700 Pfam Protein tyrosine and serine/threonine kinase 410 674 IPR001245 GO:0004672|GO:0006468
Mtr4g0005 700 Gene3D Ribonuclease Inhibitor 23 251 IPR032675 -
Mtr4g0005 700 ProSiteProfiles Protein kinase domain profile. 407 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr4g0005 700 Pfam Leucine rich repeat 140 199 IPR001611 GO:0005515
Mtr4g0005 700 Gene3D Phosphorylase Kinase; domain 1 366 483 - -
Mtr4g0005 700 MobiDBLite consensus disorder prediction 235 266 - -
Mtr4g0005 700 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 19 696 - -
Mtr4g0005 700 Gene3D Transferase(Phosphotransferase) domain 1 484 693 - -
Mtr4g0005 700 PANTHER OS01G0253100 PROTEIN 19 696 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0005 Mtr-Chr4 95685 102206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g0005 3 699 Strubbelig Receptor Gene Family AT1G78980 60.993 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mtr4g0005 PK_Tyr_Ser-Thr 2.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0005 - - mtr:MTR_4g005130 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0005 4 95685 102206 Mtr4g0005 4 95685 102206 ECH