Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g0001 ATGAAACTGAATCAAGCAGGTTCTCAGTTACCTGGACTAGCCCAACTCAATGGGAACGGACAGATGCCATCTTTAGGCGGTGTTTCACGATCAGCACTTAATATGGACCCTGAATTTCCTAGAGCACGCGAGTTTATTCAAGAGAAGATCTGTGAGACGTTATTTCGACGGCATCAGCAGCCAATTAGTGAAATTCAAAAAAGGAGGATTAAGGATCTTGCAAAACGCCTGGAGGAGGGCATGTTAAAAAATGCTCCTTCTAAGGAGGAGTACATGAACTTGGAAACACTAGAGGCTCGTTTATCTCTTTTCCTCCGACAAGCAACTATGAATAATCGCAGCCAACAGTATCCCCAGCTTGTTAGCTCGTCTCCTATTGGTACAATGATTCCAACCCCTGGTATGTCGCATGGTCCAAATTCAAACGTGGTTGTTGCATCTTCTATAGATGCCTCAATGATTTCTTCCAGTGGTGGTAATAGTGTAGTATCAACAACTTTCAATGGTGTAAATATATTACCAACTGGTGGCATACATGGAAGCTCCTTAAATAGATCTGATGGTTTATCAAATGGATATCAACAGTCTTCTACCAGCTTTTCTGCTGGCTCAGTGGGGAACATGTCATCAATGAGTGTGCCGAGAACTTCAAGCCAGATGATTCCTACGCCGGGATATACAGTCAACAGCAATCACTCACATATGAATGTAGATTCATCTACTAATGGTAATGTCTTCTCCAGTGCAGAGTCTACTATGGTACCACTGTCACAGCTTCAACAGCAGAAACAGCATGTTGGTGACCAAAGCCAGGTATTGCCGAACATTGGCAGCCAAATGAGTAGTGGAATGAGATCTGGTTTGCTACATAAACAGTTTACAAACTCAAATGGTGCTGTGAATAGTGGGCTAGGCCTGATTGGTAACAATATTCAACTCCCAAATGAACCAGTCACCTCCGATGGCTATGCTTCAACTTATGCTAATTCCCCTAAACACATACATCAGCACTTTGATCAAAATCAGAAACCAGTAATGCAGGGTGATGGATACGGATTGAATAATGTTGACCCTTTTGCTTCTGGAAACTTTTATGCATCTGCAACATCTTCTGGGTCTATGATGAACACTCGGAACACAAATTCAGTACAATTGCCATCAATACCCAAAACTAGCTCGTTGATCAGCGGTCACTCAAATTTGCATGGTATGCAGCAGTCTGCTCACATAAAGTCTGAAGCAATCAACCAATTGGAAAAGTTGAATTTTCAGTCTTCATCAACTTCAAGAGATGCCCTTCTGCATTCTCAACAGCAGTATCAGCAAAGGCCCCATCAATTTCAACAGTCAGAGCAGTATCCTCAATCACAGCAACAATTTCAATTGAAACTACATAGTCAACAGCCTCGGCATTTGGTCAATGATAATGCTTTCAATCAGTCTCAGTTGTCTTCCAATCTAGAAAACCAAGTGAAGTCAGAGCCTGGAATTGAGCATCATAAAGAAGTGCTCAGTTCTCATGTTCCTGAACAGTTCCACATGTCTGAGATACAGAATCAGTTCCAGCAGAACTCATCTGAAGATTGCTCTAGAGCTCAATACCTTTCCTTTCCATCTGGTCAGCATAATTTATCCTCATCAGTACCTCAAAGTTCGCAACAAATGTTGCATCCACACCATTTGGTTGCAGAATCTCAAAATAAGTTCAGCTGTCTTACAGTTGAGGCTCAATGCAATTCCAAACAATGGACTGACTCACAAGATGGTAACCCAATGTCTAACAATAGTTCACACGACCATCATCTCCATGTGGATTTTCATCAAAGAATATCAGGAAAGGATGAAGCTCATTGCAATAATTTATCATCAGATGTATCTATGGGCCAAGCCGTTGCTCCTAGGGGTGCAGCTGAGCCGCTAGACCCAGGAAGTACTACCAAAAATGCACACAGGAATCAACAACGGTGGCTTTTATTTCTACTTCATGCTCGACGATGTTCTGCTCCTGAAGGACGATGCCAAGAACGCTTTTGTTCTTTTGCACAGAAGCTATGTAGGCACATGGATGGATGCAACCTGCGCCATTGTCCGTACCCTCGTTGTCATCATACTAAGGAATTGTTTCATCATTTTATACACTGCAAGGATCCATGTTGCCCTGTTTGTGTTTTTGTAAAAAAATGCCGGCGGGCATGTCAACTTAAGGCTCAGAGTCAGCCACCATCTGAATCGAGTTTGCCAAGTGTGGTAAATGGGTCCTGTAAATCTTACAATATTACCGCCACGTCATCAAGATTGATCTCAAAACCCACATTAGTTGTGGAAACATCAGAAGACCTGCACCCATCTGTAAAACGCATAAAGATTGAGCATTCCACTCAGTCTGTTAATCTTGAAAAGGACAACTCTGCTTCTTCTGTTTCTGCAAATTGTGATTCTGTAGTTTCCAGGGACGCTCAGTCCCAAACATATCCCAATGCGGAGAAGTCTATCTCAATTAAATCTGAGATTACAGAAGTAAAAGCAGAAGTTTTGGCTCATGCCAAGCTTAGTGAAATGAAGATGGATTCGAGTAATGCAGATGATAAAATTCCTGATGGTGAGCCTGTGAAGAATGATGATACTGGTAATTTAGCTAGGCCAGAAAATATGAAAACTGAGAAAGAAGTTGGGCAAGATAAGCAAGAACATGTGATGCAGCCAGGTGAAAATGCAGCTGGAACAAAGTCTGGTAAGCCAAAAATAAAAGGGGTCTCTTTAACCGAATTATTTACTCCAGAGCAAGTCAGGGAACATATTACTGGTCTCAGGCAATGGGTTGGCCAAAGCAAATCAAAGGCAGAGAAGAATCAAGCAATGGAGCACTCTATGAGTGAGAATTCCTGTCAATTATGTGCTGTGGAGAAGCTTACGTTTGAACCACCACCTATTTATTGCACGACATGTGGGGTTCGCATCAAACGTAACAATATGTACTATACCATGGGTACTGGTGATACTCGACATTATTTTTGCATCCCATGCTATAATGATGCTCGTTCTGAACACATCGTTGTTGACGGGACTCCCATTGCCAAGTCAAGATTGGAAAAGAAGAAGAATGATGAGGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACACCAAATATGTGCCTTGTTTAATGGTAGAAGAAATGATGGTGGACAAGCTGAATACACTTGCCCTAACTGCTACATTGAAGAGGTAGAACGAGGAGAGCGCATGCCATTACCCCAAAGTGCTGTTCTTGGAGCCAAGGATTTACCGAGAACTATTCTTAGCGACCATATAGAACAACGATTATTTAAGCGGCTAAAGCACGAAAGACAAGAGAGAGCAAGATTTCATGGGAAAAGCTATGATGAGGTTCCTGGAGCTGATTCCCTTGTTGTAAGAGTTGTATCATCTGTTGACAAGAAGTTAGAAGTGAAACAGCGATTTTTGGAGATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCATATAAATCAAAGGTAGTTTTGTTGTTTCAAAAGATTGAAGGTGTGGAAGTATGCCTATTTGGCATGTATGTTCAAGAATTTGGAGCTGAAAGTCAATTTCCCAATCAGCGTCGGGTGTATCTTTCATATTTGGACTCCGTGAAGTATTTCAGGCCCGAGATTAAATCAGTAACTGGAGAGGCTCTTCGAACATTTGTTTACCATGAAATTCTGATTGGGTACCTTGAATATTGTAAGCTCCGTGGTTTTACCAGCTGCTATATATGGGCTTGTCCTCCGCTGAAGGGTGAAGATTATATTTTGTATTGCCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTTCGTGAATGGTATCTAGCCATGTTAAAAAAAGCTGCGAAGGAGAATGTTGTGGTCAATATCACCAACTTATATGATCATTTCTTCACATCCACCGGTGAATGTAGGGCTAAGGTTACAGCTGCAAGACTCCCATATTTTGATGGTGACTACTGGCCTGGGGCTGCAGAAGATTTGATTTATCAGCTACGCCAAGAGGAAGATGGAAGAAAACAAAATAAAAAAGGAACAACCAAAAAAACTATCACAAAAAGGGCTTTAAAAGCATCTGGTCATTCAGATCTTTCAGGAAATGCATCAAAAGATCTGCTCCTCATGCACAAACTTGGTGAAACCATTTCCCCAATGAAGGAAGATTTTATTATGGTTCATTTGCAGCATGCATGTACCCACTGCTGCATTCTAATGGTGTGTGGCAACCGCTGGGTTTGTAATCAGTGCCAGAACTTTGAGATTTGTGATAAGTGTTATGAAGCAGAGCTAAAACGTGAAGAGAGAGAAAGACATCCTATTAATCAGAGGGAAAAACACAGTCTTTATCCAGTTGAAATTACTGATGTACCATTTGATACAAAGGATAAAGATGATATTCTTGAGAGTGAATTCTTTGACACTAGACAGGCATTTCTGAGTCTCTGCCAGGGAAATCATTATCAGTATGATACACTAAGGCGGGCCAAGCATTCCTCAATGATGGTCCTATATCATCTTCATAATCCAACTGCTCCTGCATTTGTGACCACTTGTAATATATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGAGTACGACGTATGCAATTCTTGTTATCAGAAGGGAGGCATTGATCATCCTCATAAGTTGACAAATCATCCGTCAGTGGCGGATCGTGATGCTCAGAACAAAGAAGCAAGACAAGTTCGAGTATTGCAGCTAAGGAAAATGCTTGATCTTCTAGTGCATGCATCCCAATGTCGTTCTCCACATTGCCAATATCCTAATTGTCGCAAAGTGAAGGGCCTCTTCCGCCATGGTATGCACTGCAAAACACGTGCTTCTGGAGGCTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGTGCATGCAAAGAATCCGAATGCCATGTGCCACGATGCAGAGATTTAAAAGAACATCTAAGGAGGCTGCAGCAACAGTCTGATTCACGACGTAGAGCTGCTGTAATGGAAATGATGAGGCAAAGAGCTGCAGAAGTTGCTAACAATGCTGGATGA 5130 0.4172 MKLNQAGSQLPGLAQLNGNGQMPSLGGVSRSALNMDPEFPRAREFIQEKICETLFRRHQQPISEIQKRRIKDLAKRLEEGMLKNAPSKEEYMNLETLEARLSLFLRQATMNNRSQQYPQLVSSSPIGTMIPTPGMSHGPNSNVVVASSIDASMISSSGGNSVVSTTFNGVNILPTGGIHGSSLNRSDGLSNGYQQSSTSFSAGSVGNMSSMSVPRTSSQMIPTPGYTVNSNHSHMNVDSSTNGNVFSSAESTMVPLSQLQQQKQHVGDQSQVLPNIGSQMSSGMRSGLLHKQFTNSNGAVNSGLGLIGNNIQLPNEPVTSDGYASTYANSPKHIHQHFDQNQKPVMQGDGYGLNNVDPFASGNFYASATSSGSMMNTRNTNSVQLPSIPKTSSLISGHSNLHGMQQSAHIKSEAINQLEKLNFQSSSTSRDALLHSQQQYQQRPHQFQQSEQYPQSQQQFQLKLHSQQPRHLVNDNAFNQSQLSSNLENQVKSEPGIEHHKEVLSSHVPEQFHMSEIQNQFQQNSSEDCSRAQYLSFPSGQHNLSSSVPQSSQQMLHPHHLVAESQNKFSCLTVEAQCNSKQWTDSQDGNPMSNNSSHDHHLHVDFHQRISGKDEAHCNNLSSDVSMGQAVAPRGAAEPLDPGSTTKNAHRNQQRWLLFLLHARRCSAPEGRCQERFCSFAQKLCRHMDGCNLRHCPYPRCHHTKELFHHFIHCKDPCCPVCVFVKKCRRACQLKAQSQPPSESSLPSVVNGSCKSYNITATSSRLISKPTLVVETSEDLHPSVKRIKIEHSTQSVNLEKDNSASSVSANCDSVVSRDAQSQTYPNAEKSISIKSEITEVKAEVLAHAKLSEMKMDSSNADDKIPDGEPVKNDDTGNLARPENMKTEKEVGQDKQEHVMQPGENAAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNDARSEHIVVDGTPIAKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIEEVERGERMPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKHERQERARFHGKSYDEVPGADSLVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGAESQFPNQRRVYLSYLDSVKYFRPEIKSVTGEALRTFVYHEILIGYLEYCKLRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLKKAAKENVVVNITNLYDHFFTSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGHSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACTHCCILMVCGNRWVCNQCQNFEICDKCYEAELKREERERHPINQREKHSLYPVEITDVPFDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNSCYQKGGIDHPHKLTNHPSVADRDAQNKEARQVRVLQLRKMLDLLVHASQCRSPHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG* 1710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g0001 1709 ProSitePatterns Zinc finger ZZ-type signature. 1537 1564 IPR000433 GO:0008270
Mtr4g0001 1709 MobiDBLite consensus disorder prediction 370 408 - -
Mtr4g0001 1709 Pfam TAZ zinc finger 1601 1671 IPR000197 -
Mtr4g0001 1709 Pfam TAZ zinc finger 654 722 IPR000197 -
Mtr4g0001 1709 PANTHER CBP/P300-RELATED 166 1708 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mtr4g0001 1709 Pfam Histone acetylation protein 1135 1352 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mtr4g0001 1709 CDD PHD_HAC_like 1004 1076 - -
Mtr4g0001 1709 ProSitePatterns Zinc finger PHD-type signature. 1005 1076 IPR019786 -
Mtr4g0001 1709 SUPERFAMILY RING/U-box 1392 1463 - -
Mtr4g0001 1709 MobiDBLite consensus disorder prediction 200 219 - -
Mtr4g0001 1709 ProSiteProfiles Zinc finger TAZ-type profile. 644 725 IPR000197 -
Mtr4g0001 1709 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1094 1530 IPR031162 GO:0004402
Mtr4g0001 1709 SMART zz_5 1411 1455 IPR000433 GO:0008270
Mtr4g0001 1709 SMART zz_5 1531 1576 IPR000433 GO:0008270
Mtr4g0001 1709 Pfam PHD-finger 1035 1077 IPR019787 -
Mtr4g0001 1709 SMART KAT11_2 1127 1424 IPR013178 GO:0004402|GO:0006355|GO:0016573
Mtr4g0001 1709 Pfam Zinc finger, ZZ type 1534 1575 IPR000433 GO:0008270
Mtr4g0001 1709 PANTHER ZINC FINGER, TAZ-TYPE-RELATED 166 1708 - -
Mtr4g0001 1709 SUPERFAMILY RING/U-box 1513 1579 - -
Mtr4g0001 1709 SUPERFAMILY TAZ domain 1593 1676 IPR035898 -
Mtr4g0001 1709 SMART TAZ_2 647 725 IPR000197 -
Mtr4g0001 1709 SMART TAZ_2 1594 1672 IPR000197 -
Mtr4g0001 1709 MobiDBLite consensus disorder prediction 1 20 - -
Mtr4g0001 1709 MobiDBLite consensus disorder prediction 854 896 - -
Mtr4g0001 1709 ProSiteProfiles Zinc finger ZZ-type profile. 1532 1584 IPR000433 GO:0008270
Mtr4g0001 1709 MobiDBLite consensus disorder prediction 426 467 - -
Mtr4g0001 1709 Gene3D TAZ domain 642 730 IPR035898 -
Mtr4g0001 1709 ProSiteProfiles Zinc finger TAZ-type profile. 1591 1674 IPR000197 -
Mtr4g0001 1709 SUPERFAMILY TAZ domain 646 728 IPR035898 -
Mtr4g0001 1709 SUPERFAMILY FYVE/PHD zinc finger 1038 1078 IPR011011 -
Mtr4g0001 1709 MobiDBLite consensus disorder prediction 854 914 - -
Mtr4g0001 1709 Gene3D - 1531 1581 IPR043145 -
Mtr4g0001 1709 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1029 1077 IPR013083 -
Mtr4g0001 1709 ProSiteProfiles Zinc finger ZZ-type profile. 1412 1475 IPR000433 GO:0008270
Mtr4g0001 1709 Gene3D - 1408 1467 IPR043145 -
Mtr4g0001 1709 Gene3D TAZ domain 1588 1705 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g0001 Mtr-Chr4 48416 61081 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Mtr4g0001 HAT_KAT11 6.9e-30 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g0001 K04498 - gmx:100809207 2810.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g0001 4 48416 61081 Mtr4g0001 4 48416 61081 ECH