Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4463 ATGGCAGATCCACGAGCGTTGCTGTTGCTGCTGAATTCAGAGACTCAGTTCCCCCGAGTAGCCTCCGTTGATGTCTTCCGTGGCCTCTCTGTTTTTCTTATGATATTTGTCGATTACGGTGGCTCCATCTTCCCCATCATTTCTCATGCTCCATGGAATGGTCTTCACCTTGCTGATTTCGTCATGCCTTTTTTTCTCTTTCTTGTTGGTATTTCTCTTGCACTTGTTTATAAGAACAAGAGATCAAGACCAACACAATCTTCTACTTGGAAACCATTACTTAGATCATTCCAACTCTTTATTCTTGGCATCCTTCTTCAAGGTGGTTATTTTCATGGGATTCATTCCTTCACATACGGTGTTGACGTTCAAACTATACGCTTCTTTGGCGTTTTACAGAGGATTTCTATTGGCTACATTGTTGCTGCTTTATGCCAGATTTGCCTTCCAACTCTCCCATCCAAACATACTAGTTTCTTCAAGACTTATTACTCCCATTGGTTTGTAGCAGCAATATTGTTAGCAATTCACTCCGGATTGTTGTATGGTCTACATGTTCCAGATTGGCAGTTCGATGCATCACTCTCTACCTCTTCTTTGCCTCCAATTCAAGCCGGCAATGTTTACACAGTGAATTGTTCGGTGAGAGGTGATCTTGGACCTGCCTGCAATTCTGCTGGAATGATCGACCGCTATATTCTTGGTCTTGACCATTTATACAAAAAGCCTGTTTTCAGAAATCTTAAGGAGTGCAATATGTCTAGCACTGGCCAAGTTTCAGATAGTTCACCGTCATGGTGTCACGCGCCTTTTGATCCAGAAGGCATTTTAAGCTCTATAACAGCTGCAGTTTCATGCATAATTGGACTTCAATATGGGCACATTCTTGCCAACTTAGAGGACCACAAAGGGCGCCTAAATCAATGGCTTGGTTTTTCAGTTTCATTTTTGGCTCTAGGGTGGTTCCTTGCGTTAATAGGAATTCCTCTAAATAAATCTCTGTACACGGTCAGTTATATGCTGCTTAGCTCTGCAGCTTCCGGTCTCACATTTATGGCTTTGTATATTCTGGTAGATGTTTACGGGTACAGACGTTTGACAAGTGTGTTGGAGTGGATGGGAAAACACTCTTTGAGTATATTTGTTCTTGTATCTTCAAACTTGGCCGTGATTGCAATTCAAGGATTTTATTTGACCAAACCCGAATACAACATTATAGAAAAAATGTCTAAAGAAGAAGGGCATCCACCACATCCTCACGGTAAGGACTACGTAGACCCACCACCAGCACCCCTCCTTGACTTTGCTGAGATTAAGCTCTGGTCTTTCTACAGAGCTCTCATCGCTGAGTTCATAGCCACCCTCCTCTTCCTCTACGTCACTGTCGCCACCGTCATTGGTCACAAAAAACAAACTGCTCCATGTGACGGTGTTGGCCTTTTAGGCATAGCATGGTCCTTTGGTGGCATGATCTTTGTCCTTGTCTACTGCACTGCCGGTATCTCCGGTGGCCACATTAACCCTGCGGTCACATTCGGCCTTTTCTTGGCTCGTAAAGTGTCTCTCATAAGAGCGGTGTTATACATGGTAGCACAGTGTTTAGGTGCTATCTGTGGCGTTGGGTTGGTGAAGGCATTCATGAAACACCCTTACAACCACCTAGGCGGCGGTGCTAACTTTGTAGCTTCCGGTTACAGCAAAGGCTCTGCCCTAGGTGCTGAAATGATCGGAACTTTTGTGTTGGTTTACACTGTTTTCTCTGCTACTGACCCCAAGAGAAGCGCACGTGACTCACATGTCCCTGTTTTAGCTCCTTTGCCCATTGGTTTTGCTGTTTTTATGGTTCACCTTGCAACTATACCAATCACCGGTACCGGAATCAACCCTGCAAGGAGCTTCGGTGCTGCTGTCATCTTCAACAATGCCAAAGTTTGGGATGACCATTGGATCTTCTGGGTTGGACCGTTCGTGGGAGCTTTGGCAGCGGCTGCATACCATCAATACATTCTTAGAGCGGCGGCTATCAAGGCGTTGGGCTCCTTTAGAAGCAACCCCACCAACTAA 2064 0.4501 MADPRALLLLLNSETQFPRVASVDVFRGLSVFLMIFVDYGGSIFPIISHAPWNGLHLADFVMPFFLFLVGISLALVYKNKRSRPTQSSTWKPLLRSFQLFILGILLQGGYFHGIHSFTYGVDVQTIRFFGVLQRISIGYIVAALCQICLPTLPSKHTSFFKTYYSHWFVAAILLAIHSGLLYGLHVPDWQFDASLSTSSLPPIQAGNVYTVNCSVRGDLGPACNSAGMIDRYILGLDHLYKKPVFRNLKECNMSSTGQVSDSSPSWCHAPFDPEGILSSITAAVSCIIGLQYGHILANLEDHKGRLNQWLGFSVSFLALGWFLALIGIPLNKSLYTVSYMLLSSAASGLTFMALYILVDVYGYRRLTSVLEWMGKHSLSIFVLVSSNLAVIAIQGFYLTKPEYNIIEKMSKEEGHPPHPHGKDYVDPPPAPLLDFAEIKLWSFYRALIAEFIATLLFLYVTVATVIGHKKQTAPCDGVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGLVKAFMKHPYNHLGGGANFVASGYSKGSALGAEMIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNNAKVWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4463 687 TIGRFAM MIP: MIP family channel proteins 449 665 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr3g4463 687 CDD MIP 445 669 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr3g4463 687 Pfam Major intrinsic protein 438 665 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr3g4463 687 Gene3D Glycerol uptake facilitator protein. 430 687 IPR023271 -
Mtr3g4463 687 SUPERFAMILY Aquaporin-like 437 671 IPR023271 -
Mtr3g4463 687 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE ISOFORM X1 14 410 - -
Mtr3g4463 687 PANTHER LD22376P 14 410 - -
Mtr3g4463 687 ProSitePatterns MIP family signature. 505 513 IPR022357 -
Mtr3g4463 687 PRINTS Major intrinsic protein family signature 445 464 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr3g4463 687 PRINTS Major intrinsic protein family signature 487 511 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr3g4463 687 PRINTS Major intrinsic protein family signature 524 543 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr3g4463 687 PRINTS Major intrinsic protein family signature 573 591 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr3g4463 687 PRINTS Major intrinsic protein family signature 609 631 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr3g4463 687 PRINTS Major intrinsic protein family signature 649 669 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4463 Mtr-Chr3 58630987 58638241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4463 409 687 Major Intrinsic Protein MIP AT4G35100 88.612 4.56e-177 504