LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr3g4459	ATGTCGTCAAACCACGAACACGAAGATCTGGATCTCCTGCTTTCTCTTGACGACAGAGTTCCTGAAACCCCTCCCGCTTCTCCTTCTCCGCTTGATGTGGATGATGATGCTGTGTCTTACAAGCACAGGGAGAAACCTGATATGTCCGTCTTCAGAGACGCCGTTCAAGATTGTCTTCATTCCCAACCCTCTAACCCTAACCCTAACCCTAAATCCATTACCAAACCCCTCACCGACGATCCCCAACTTGACAAATTCTCTGGTCTTCGCATTACCAACCAATGTTTAACCCCTGCTGAGCTTAGGGAATCTGTTCAAGACATTCGTTTTGTTCGCTTACCCGTCATTAAGAATTTGGTGAATGGAGATTCTTTCTCTGGAAGTTGGGTCACTGTTGGAGTGTTGACTGAGAAGGGGATTCAGAAAACAAGTTCAAATGGGAAGAGCTATTGCATATGGAAAATTGGTTCTTTAGATGAAAATACTATTTCTCTTTTCTTGTTTGGTAATGCTTATCAGAGGAACTGTCAAGAGAAGGAAGGAACCGTCTTTGCACTCTTCAATTCTACTGTCCGCAAGGATGCCAAGGGTAATGGTTTTTCTTTGAGTATATACTCCCCTAATCAAATTATGAAGATGGGCACCTCTGTTGATTATGGAGTTTGCAAAGGGAAAAGAGCGGATGGGATGTCTTGTACACTGGCAATAAATAAGCGTCAGGGGACTTATTGTAAATATCATAAATCAAAATCATCAGAGAAATATTCCACAGTACGAACTGAACTCAAGGGAGGGAACTTAAGAACAGCATTTCGGCCAAGAGATTATCTCAAGTCAGAAGGAATATACTTAGTTGACCCCCTTGCCGACAAAACAAACTTGAAAAAATCTAAGCCAGTGAAATTGTTATCTGTGGATGGTATCAGAAAGGCTTTGAGTAATGCAGGAAAAGTAACAACAGCTTCACACTCGCAAGGGATTAGATTTCTTTCCGAGGTTGCAGGAAAATTTGATCCAAAAATGATGAAAAAAGAACCAAAGACTCCAAATGATCAAAGCAAATGCACAACGAAGAGGAAATCATCTTCTGTTAATATGGGGTACTCTTCTGTCATAAGAAACCAGCAGTTGGATGTAAAAAAAGCAAAGACAGAGAGGCAAGTTTTTGTTGATAAAGCCACAAAGAGTACAGGCAAGATGATTGAATTAGATCTTATTAGTTCGGATGAGGACTTCTGA	1239	0.41	MSSNHEHEDLDLLLSLDDRVPETPPASPSPLDVDDDAVSYKHREKPDMSVFRDAVQDCLHSQPSNPNPNPKSITKPLTDDPQLDKFSGLRITNQCLTPAELRESVQDIRFVRLPVIKNLVNGDSFSGSWVTVGVLTEKGIQKTSSNGKSYCIWKIGSLDENTISLFLFGNAYQRNCQEKEGTVFALFNSTVRKDAKGNGFSLSIYSPNQIMKMGTSVDYGVCKGKRADGMSCTLAINKRQGTYCKYHKSKSSEKYSTVRTELKGGNLRTAFRPRDYLKSEGIYLVDPLADKTNLKKSKPVKLLSVDGIRKALSNAGKVTTASHSQGIRFLSEVAGKFDPKMMKKEPKTPNDQSKCTTKRKSSSVNMGYSSVIRNQQLDVKKAKTERQVFVDKATKSTGKMIELDLISSDEDF*	413

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr3g4459	412	MobiDBLite	consensus disorder prediction	58	79	-	-
	Mtr3g4459	412	MobiDBLite	consensus disorder prediction	1	46	-	-
	Mtr3g4459	412	Pfam	Primase zinc finger	214	257	IPR015408	GO:0005634\|GO:0006260
	Mtr3g4459	412	MobiDBLite	consensus disorder prediction	1	16	-	-
	Mtr3g4459	412	Gene3D	-	75	248	IPR012340	-
	Mtr3g4459	412	MobiDBLite	consensus disorder prediction	58	76	-	-
	Mtr3g4459	412	PANTHER	PROTEIN MCM10 HOMOLOG	38	354	IPR040184	GO:0003690\|GO:0003697\|GO:0006270

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr3g4459	19	411	Core DNA Replication Machinery Family	AT2G20980	52.764	5.58e-127	370

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr3g4459	K10736		-	gmx:100527758	543.117