Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4458 ATGACAGTGAAAGAGAGATGTGTTTTGGTGGGAATTAGAATTGATAGGCATGGCAGCAGACAGCTCCTCAACTGGGCTATAGCCAAAGTTGCTCAACCTCGTGATTATGTTATTGCAATCCATGTTGTTACCACTATAGATCATGTTTCTGAAAGCAAGGCCTTGGTAGATGATTATTTAGAGGTTTATCAAGGGCTTTGCGATGCAAAAAAGGTAAGTCTCTCGGGTCATATCTTGACAGGAACAACTTTTAGAAATATTCTCATCAGAGAAGCAAAAAACCGTGCTGCTATTGCTCTAGTGGTAGGGGGTGGAGCTTCCACGGCTAAATATTGCGCCAAACGACTACCAGGCAGCACTAATGTTATCGGTATTCAGGGTGCAAGAATTGTGTTCCAAAGGTGCACAGATAATAAACAACTAATAGGTGGCATTATAGAGGATCCTAGACCGAGTCTTATCAGCACGGTGGTCCAGTCTGCATCTGGCACAGACCACTCAGAGAATGAGGATGAGAAATCGAAAAGCCAAGAAGGTAACAGAAAATGGGAGGAAGAAACATTTAAAGGAGAAATGAAAGTGTCATCAAGATTATCAACATCACAGAAGCTTGGTTGGCCACTTCTCCGCAGGATGCATACAGAAATTTCAAGGGACATGTCTGTTGTACAATGGGTAATGAACTTACCGGATCGCTCAACACACAAATATAATAACAATCGACACAGTTCATCTCAAATTGAGGGCCAGAGCTATAAAAATGTTATTAGTTTCAGTAGCTGCAAGTGGTTTATCTTTGAGGTTCTCAACTCTTGCACTTGTCAATTCTCTTCAGAAAATGTGATTGGAATTGGAGGGAGCAATCGCGTGTACAGAGGAACCCTCCCCGATGGGAAGCCGGTGGCAATCAAAGTTATGCAGTCATCAAAAGAAGCTTTCAAAGATTTTGCACTTGAAGTTGAAATAATGTCCTCGTTGAACCACCCACGCATCGCTCCTCTGCTAGGGATTTGCATTAGAGATGAGACTTTGATATCTGTTTATGATTATTTCCCCCAAGGAACCTTAGACCAAAATCTACGCGGTAAGAACAAGGATGAATCTATGTTGACATGGGAAGACAGATTTAAGGTAGCTGTTGGGATTGGTGAAGCACTGAATTACCTGCACAAGCACAACCAAACCTCCAAGCCTATTATACATAGAGACGTCAAGTCTTCCAACATTCTTCTTTCTGAAGGGTTTGAGCCACATTTATCTGATTTTGGACTTGCGATGTGGGGACCAACAACTTCATCTTTTGTGATACAAGACGATGTAGTTGGAACTTTTGGTTATCTTGCACCTGAATACTTCATGTATGGAAAGGTTAGTGACAAGATAGATGTTTATGCCTTTGGTGTGGTGCTACTTGAACTTATATCAGGAAGGGAACCAATTGACTCCGAAACTTGTGAAGGACACGAAATCAGTTTGGTCACATGGGCAAAACCAATTTTAGAGAGTGGGGATGTTAAAAGCTTATTGGATCCAAAGTTGCAAGGAAAATTTGATGTAGCACAAATGCACAGAATGGTTCTTGCAGCATCTCTGTGCATTACACGAGCTGCGCGACTTCGTCCTAATATGAATCAGATACTGAAGATCTTAAACGGATGTGATGAGAAAGTCGAAAACATGTTTAAATCTGAGGAGAGTGATCATGATCATTCTGAAAATCTTGATGATGAAGTCTATCCAAATTCAAGTGCAGAATTGCACCTTAGCCTTGCATTACTTGATGTAGACAATGATACTGCATCATCGTATAGTAGTATCAGCATTAATGAATATTTGAAAGAACATTGGAGCCGATCATCTAGTTTCAATTAG 1872 0.4092 MTVKERCVLVGIRIDRHGSRQLLNWAIAKVAQPRDYVIAIHVVTTIDHVSESKALVDDYLEVYQGLCDAKKVSLSGHILTGTTFRNILIREAKNRAAIALVVGGGASTAKYCAKRLPGSTNVIGIQGARIVFQRCTDNKQLIGGIIEDPRPSLISTVVQSASGTDHSENEDEKSKSQEGNRKWEEETFKGEMKVSSRLSTSQKLGWPLLRRMHTEISRDMSVVQWVMNLPDRSTHKYNNNRHSSSQIEGQSYKNVISFSSCKWFIFEVLNSCTCQFSSENVIGIGGSNRVYRGTLPDGKPVAIKVMQSSKEAFKDFALEVEIMSSLNHPRIAPLLGICIRDETLISVYDYFPQGTLDQNLRGKNKDESMLTWEDRFKVAVGIGEALNYLHKHNQTSKPIIHRDVKSSNILLSEGFEPHLSDFGLAMWGPTTSSFVIQDDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPIDSETCEGHEISLVTWAKPILESGDVKSLLDPKLQGKFDVAQMHRMVLAASLCITRAARLRPNMNQILKILNGCDEKVENMFKSEESDHDHSENLDDEVYPNSSAELHLSLALLDVDNDTASSYSSISINEYLKEHWSRSSSFN* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4458 623 PANTHER OS01G0253100 PROTEIN 5 616 IPR045271 GO:0004714|GO:0006468
Mtr3g4458 623 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 616 - -
Mtr3g4458 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Mtr3g4458 623 Pfam Protein kinase domain 277 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4458 623 Gene3D Phosphorylase Kinase; domain 1 234 350 - -
Mtr3g4458 623 MobiDBLite consensus disorder prediction 157 187 - -
Mtr3g4458 623 SUPERFAMILY Protein kinase-like (PK-like) 255 550 IPR011009 -
Mtr3g4458 623 ProSiteProfiles Protein kinase domain profile. 276 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4458 623 CDD USP_Like 8 117 - -
Mtr3g4458 623 Gene3D Transferase(Phosphotransferase) domain 1 351 579 - -
Mtr3g4458 623 MobiDBLite consensus disorder prediction 165 187 - -
Mtr3g4458 623 SMART serkin_6 276 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4458 Mtr-Chr3 58593585 58596751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4458 232 558 Trihelix Transcription Factor Family AT5G38560 39.039 4.12e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mtr3g4458 Pkinase 1.6e-38 CL0016