Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4446 ATGGGTGTTCGTCTTCCATTTATGGTTCTTCATGCAAACAAGATATTCAAGTCGTCGTCGTCGTCATCACATCATCTCCATAGTAGAAATCATTCCAATGTTCCAAAGGGCCATGTAGCAGTCTATGTTGGAGAGGCTCAAAAGAAGCGTTTTGTGGTTCCAATATCTTACTTAAACCACCCTTCATTTCTTGATTTGTTAAATCGAGCTGAGGAAGAGTTTGGTTTCAATCATCCAATGGGTGGTCTCACTATTCCATGCAAAGAAGAGGCTTTTATTAATCTTACCTCTCAACTGCACGCCTGCCTCTCTTGA 315 0.4127 MGVRLPFMVLHANKIFKSSSSSSHHLHSRNHSNVPKGHVAVYVGEAQKKRFVVPISYLNHPSFLDLLNRAEEEFGFNHPMGGLTIPCKEEAFINLTSQLHACLS* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4446 104 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 101 - -
Mtr3g4446 104 Pfam Auxin responsive protein 19 97 IPR003676 GO:0009733
Mtr3g4446 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4446 Mtr-Chr3 58504661 58504975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4446 9 104 Calmodulin-binding Proteins AT4G34750 41.837 8.56e-17 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4446 K14488 - cam:101504274 177.178