Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4445 ATGGCTTTGTTTTGGAGGTTCTCACTGAGGATTAGGCTTGTGAAAGAGAAATGTTTCAGACAAGCTCTAAACATAACAGCTATTAGAAGGACTTCATTTACGGGTAGCCAAACATCATCAAAATCTGTGAATGTGCCAAAAGGGTGTCTTGCAGTGTATGTTGGAGAGAAAATGAAGCGGTTTGTGATCCCTATGTCTTACTTGAACCAACCATCATTTCAAGACTTGTTGAGTCGGGCGGAGGAAGAATTTGGATACGATCATCCAATGGGTGGCCTCACAATTCCTTGCACAGAAGATGTTTTCTTTCATATTACTTCTCGCTTCAATGAACTATAA 339 0.4041 MALFWRFSLRIRLVKEKCFRQALNITAIRRTSFTGSQTSSKSVNVPKGCLAVYVGEKMKRFVIPMSYLNQPSFQDLLSRAEEEFGYDHPMGGLTIPCTEDVFFHITSRFNEL* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4445 112 Pfam Auxin responsive protein 30 107 IPR003676 GO:0009733
Mtr3g4445 112 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 25 110 IPR003676 GO:0009733
Mtr3g4445 112 PANTHER AUXIN-INDUCED PROTEIN 6B 25 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4445 Mtr-Chr3 58498505 58501796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4445 20 105 Calmodulin-binding Proteins AT3G43120 40.698 2.39e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4445 K14488 - gmx:106798972 141.739