Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4425 ATGCGTTCCTCTAAACCGTTGATCCCAACATACGTGGCTATAATCGAAGAGATGAAAGCTGATTCACGAGACGTTCGTGTCCGTTGGTATTACTGGCCGGAGGAGACAAAGAAGGGTCGGCGTCATTTCCATGGCTCAAAGGAGCTTATTCTATCTGATCATTTTGATGTTCAGAGTGTTGATACAATCGAAGGAAAATGTACTGTTCACAGTTTGAAGAAGTACATGAAGCTTGATGTTGTTGGTGATGATGATTTCTTCTGTCGATTCAACTACAATTCCGCTACTGGTGCTCTCACTCCTGATATAGTTCAAGTGTACTGTAAATGTGAGATGCCATATAATCCTGATGAAGTTATGGTCCAGTGTGATCACTGCACTGATTGGTGGATACTAAACGCCGTCAAAGATGAAAGTGATGGTGTATTAGATATATAA 438 0.4132 MRSSKPLIPTYVAIIEEMKADSRDVRVRWYYWPEETKKGRRHFHGSKELILSDHFDVQSVDTIEGKCTVHSLKKYMKLDVVGDDDFFCRFNYNSATGALTPDIVQVYCKCEMPYNPDEVMVQCDHCTDWWILNAVKDESDGVLDI* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4425 145 PANTHER CHROMATIN REMODELING PROTEIN SHL 1 131 IPR045205 GO:0006325|GO:0035064
Mtr3g4425 145 SUPERFAMILY FYVE/PHD zinc finger 100 130 IPR011011 -
Mtr3g4425 145 SMART BAH_4 1 103 IPR001025 GO:0003682
Mtr3g4425 145 Gene3D - 1 102 IPR043151 -
Mtr3g4425 145 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 142 IPR013083 -
Mtr3g4425 145 Pfam BAH domain 9 101 IPR001025 GO:0003682
Mtr3g4425 145 PANTHER OS08G0421900 PROTEIN 1 131 - -
Mtr3g4425 145 ProSiteProfiles BAH domain profile. 1 103 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4425 Mtr-Chr3 58261612 58264941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4425 25 93 Core DNA Replication Machinery Family AT4G12620 36.232 9.80e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4425 - - mtr:MTR_3g117280 281.567