Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4417 ATGGCTTCTTCAAGTGGAACATCTTCAGGCTATTCAACACTTCCAAATTCAGGTTCAGAGGAAGATTTGATGCTTCTGATGGATCAAAGAAAAAGAAAGAGAATGATATCGAACCGCGAATCAGCAAGAAGATCTCGAATGAGGAAACAAAAGCACTTAGATGATCTTGCTGTTCAGTTGAGTCAACTAAGGAATGAGAATCAACAGATTCTAACTTCTGTGAACCTAACAACTCAACGATTCTTAGCTGTTGAATCTGAAAACTCAGTGCTTAGAGCTCAACTGAATGAACTCAACAGCAGATTTGAGTCTTTGAATGAGATCATCAACTTCATGAATGTTGCAAATGGTGTTTTTGAACCTGTTGATAATAATATTAATGAAAATTACTTCAACAACCCTTTGAATATGGGTTATTTGAACCAACCAATCATGGCTTCTGCAGATATGAACATGATACATTATTGA 468 0.3611 MASSSGTSSGYSTLPNSGSEEDLMLLMDQRKRKRMISNRESARRSRMRKQKHLDDLAVQLSQLRNENQQILTSVNLTTQRFLAVESENSVLRAQLNELNSRFESLNEIINFMNVANGVFEPVDNNINENYFNNPLNMGYLNQPIMASADMNMIHY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4417 155 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 151 - -
Mtr3g4417 155 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Mtr3g4417 155 Coils Coil 88 108 - -
Mtr3g4417 155 Gene3D - 28 81 - -
Mtr3g4417 155 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Mtr3g4417 155 PANTHER BZIP TRANSCRIPTION FACTOR 1 151 - -
Mtr3g4417 155 SUPERFAMILY Leucine zipper domain 30 81 IPR046347 GO:0003700|GO:0006355
Mtr3g4417 155 MobiDBLite consensus disorder prediction 1 19 - -
Mtr3g4417 155 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Mtr3g4417 155 Coils Coil 46 73 - -
Mtr3g4417 155 MobiDBLite consensus disorder prediction 1 21 - -
Mtr3g4417 155 Pfam bZIP transcription factor 30 72 IPR004827 GO:0003700|GO:0006355
Mtr3g4417 155 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4417 Mtr-Chr3 58193004 58194386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4417 26 149 bZIP Transcription Factor Family AT4G34590 56.391 5.49e-44 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr3g4417 bZIP_1 1.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4417 K25786 - nnu:104595624 200.675