Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4399 ATGGTGGATCCAAGAGGGATATTCTGGTTTGCGTTATTGCTTTTATTTCTGCGTTTTCGTGGAACATTGGAACAGACTCAGCCATTAAGTTCACCTTTGGAACGAGAATCACTTCTTCAACTAAGAACTTCTTTGGGTTTAAGAAGCAAAGAATGGCCAAGAAAACCAGACCCTTGTTTAATCTGGATTGGTATTACATGTCAGAATGGTCGTGTTGTTGGGATCAACATCTCTGGTTTTCGAAGAACAAGAATTGGTAGAAGAAACCCTCAATTTTCTGTTGACGCTTTGGCTAATTTCACTCTATTACAGTCATTTAATGCCTCTGGTTTTTATCTTCCCGGTTCTATTCCTGATTTGTTTGGTGTTAGTCTCCGTTCGCTTCGCGTGCTTGATCTTCGTTCTTGTTCCATATTCGATGTCATTCCTAACACTATTGGGAACTTGACTAGTCTTACTGGTCTTTATCTTTCTGATAATAATCTTACTGGGAATGCTCCTGATAGTTTAGGTCAACTCTCGGCTCTTTCGGTTCTTGATCTTTCGGGGAATTCCCTTACTGGCAATATACCGGAATCTTTTGGCTCTCTTGCAAATCTTTCTTCCCTTGACTTGTCTGGCAATTTTTTTTCTGGGTCTATTCCTTTGGGTATAGGGACTCTTTCTAGGTTACAACACTTGAACCTTTCGGGTAATGGCTTAAATTCTTTGCCTGCACAATTGGGTGGTCTTACTAGCTTGGTTGACCTTGATCTTAGTGAGAATTCTTTCTCCGGCGGGGTTCTTCCTGATTTGAGAGGGTTGAGAAACTTGCGGAGAATGTTACTTGGAAACAGCATGCTTAATGGACCATTGCCGGCGGACTTTTTTACTGTTTCATTGCAGTTGCAGACCGTAGTTCTGAGGAAAAACAATTTTACTGGTTCTTTGCCTGTTGAAATGTGGTCTCTGCCGAGGTTGACGTTCGTTGATGTGTCTTCCAATAGTTTCACTGGTATGCTTCCCAGTTCTAGTTCCTCTGCCGGTTCTACGGTTGCGGTGCTCAATATATCTCATAACTTGTTTTATGGAAATCTCACACCTGTGCTCAGAAGGTTCTCTTTTGTCGATCTTGCAAACAATTATTATGAGGGTAAGGTTTTGGATTTCATGCATAACGTATCAATAGATAGTAATTGCCTTCAGAACGCGACAAATCAGAAGTCAACGGTGGAATGTGCATCATTTTATGCGGAGAGGGGACTCAGTTTTGATAATTTTGGACAACCGAATACGACAAAAGCCACCGAAGGTTCTGGGAAGAGTAATAAAACTAAGATTATATTGGCGGCAGTCTTGGGTGGACTTGGTTTACTTGCAATTTTGGCGTTACTACTTGTACTGTTGATTCTGTGCACTCGTAAAAGGGGTAATTCAAGTCAAAGAGGAAACGGTGTGGGCCCTGCTCCTGCTGGAGGAAGTCCTCCGCCGCCTGGTGTATCGGTAAACCTTGCAAGTGTAGGTGACTCATTTACATATCATCAGTTGCTTCAGGCAACCGGAGATTTCAGTGATGCAAATCTCATAAAACATGGCCACACTGGGGATTTATTCAACGGTGTTTTGGAAAATGGGATCCCCGTCGTCATCAAAAGGATCGACATGCGATCTACAAAAAAGGATGCTTTTCTGTCTGAATTGGACTTTTTTAACAAGGTTTCTCATCAAAGATTTGTTCCCTTATTAGGTCATTGCTTAGAAAACGAAAACGAGAAGTTCCTGGTATATAAACTTATGCCAAAAGGGGACTTGTCTAATTGCTTATTCTTCAAAAACACCACAGCGGAAGATGGTACTTTGCAGTCGTTGGACTGGATAACTAGGTTAAAGATTGCTACTGGAGCAGCAGAGGCCGTATCATATCTTCATCATGAATGTATTCCACCTATTGTTCACAGAGATATTCAAGCGAGCAGTATACTTCTCGATGACAGATATGAAGTTCGGTTAGGGAGTCTAAGCGAAGCCAGTGGTCAAGAAGGTGATATCCATCAAAGTAAAATCACCCGGTTTCTGCGATTGCCTCAGTCCTCTGAACAAGGCGCATCTGGTTCATCAACGTCAGTTTGTGCCTACGACGTTTATTGCTTTGGGAAAGTGTTACTTGAACTGGTGACTGGTAAGCTTGGAATTAGTGCTTCCAGTGAGGGTGTATTAAGGGAATGGCTTGATCAAATTCTGCCTTGCATTAACATGTATGACAAGGAGCTCGTGACGAAAATCGTTGACCCATCTCTTGTTGTGGATGAGGATTTCTTAGAGGAAGTGTGGGCAATAGCCATTGTTGCCAGGTCATGCCTAAACCCAAAACCTTCAAGACGACCACCGATGAGATATGTTCTCAAGGCTTTGGAAAATCCTTTAAAAGTTGTAAGAGAAGAAAGTTCGAGTTCTGCGCGGCTGAAAGCAACCTCTTCCAGAGGCTCTTGGAATGCTACTTTGTTTGGTAGTTGGCGTCAGAGTTCGTCTGATGTAGCCGTAATCCCTGCAGCTTCTGGTACAAAATTAGAAGGAGCCAGTAGTTTGAAGCTTTCAGCAACTAGTAGTTCATCGTCGCGGAGACGTCATTCAAATGAGATATGCCCTGAGCCATCATTTGGCTTACCTGATGTAGAGAGGGTGGACCCCTGA 2670 0.4273 MVDPRGIFWFALLLLFLRFRGTLEQTQPLSSPLERESLLQLRTSLGLRSKEWPRKPDPCLIWIGITCQNGRVVGINISGFRRTRIGRRNPQFSVDALANFTLLQSFNASGFYLPGSIPDLFGVSLRSLRVLDLRSCSIFDVIPNTIGNLTSLTGLYLSDNNLTGNAPDSLGQLSALSVLDLSGNSLTGNIPESFGSLANLSSLDLSGNFFSGSIPLGIGTLSRLQHLNLSGNGLNSLPAQLGGLTSLVDLDLSENSFSGGVLPDLRGLRNLRRMLLGNSMLNGPLPADFFTVSLQLQTVVLRKNNFTGSLPVEMWSLPRLTFVDVSSNSFTGMLPSSSSSAGSTVAVLNISHNLFYGNLTPVLRRFSFVDLANNYYEGKVLDFMHNVSIDSNCLQNATNQKSTVECASFYAERGLSFDNFGQPNTTKATEGSGKSNKTKIILAAVLGGLGLLAILALLLVLLILCTRKRGNSSQRGNGVGPAPAGGSPPPPGVSVNLASVGDSFTYHQLLQATGDFSDANLIKHGHTGDLFNGVLENGIPVVIKRIDMRSTKKDAFLSELDFFNKVSHQRFVPLLGHCLENENEKFLVYKLMPKGDLSNCLFFKNTTAEDGTLQSLDWITRLKIATGAAEAVSYLHHECIPPIVHRDIQASSILLDDRYEVRLGSLSEASGQEGDIHQSKITRFLRLPQSSEQGASGSSTSVCAYDVYCFGKVLLELVTGKLGISASSEGVLREWLDQILPCINMYDKELVTKIVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPLKVVREESSSSARLKATSSRGSWNATLFGSWRQSSSDVAVIPAASGTKLEGASSLKLSATSSSSSRRRHSNEICPEPSFGLPDVERVDP* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4399 889 ProSiteProfiles Protein kinase domain profile. 516 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4399 889 ProSiteProfiles Leucine-rich repeat profile. 223 245 IPR001611 GO:0005515
Mtr3g4399 889 Gene3D Phosphorylase Kinase; domain 1 494 590 - -
Mtr3g4399 889 MobiDBLite consensus disorder prediction 470 492 - -
Mtr3g4399 889 PANTHER BNAA07G03560D PROTEIN 186 845 - -
Mtr3g4399 889 PANTHER BNAA07G03560D PROTEIN 10 188 - -
Mtr3g4399 889 SUPERFAMILY Protein kinase-like (PK-like) 493 797 IPR011009 -
Mtr3g4399 889 SMART LRR_typ_2 125 148 IPR003591 -
Mtr3g4399 889 SMART LRR_typ_2 221 244 IPR003591 -
Mtr3g4399 889 SMART LRR_typ_2 197 219 IPR003591 -
Mtr3g4399 889 SMART LRR_typ_2 173 196 IPR003591 -
Mtr3g4399 889 SMART LRR_typ_2 317 340 IPR003591 -
Mtr3g4399 889 SMART LRR_typ_2 149 172 IPR003591 -
Mtr3g4399 889 Gene3D Ribonuclease Inhibitor 295 438 IPR032675 -
Mtr3g4399 889 Pfam Leucine rich repeat 126 186 IPR001611 GO:0005515
Mtr3g4399 889 Pfam Protein tyrosine and serine/threonine kinase 522 795 IPR001245 GO:0004672|GO:0006468
Mtr3g4399 889 PANTHER RECEPTOR-LIKE PROTEIN 55 186 845 - -
Mtr3g4399 889 PANTHER RECEPTOR-LIKE PROTEIN 55 10 188 - -
Mtr3g4399 889 Gene3D Ribonuclease Inhibitor 190 294 IPR032675 -
Mtr3g4399 889 Gene3D Transferase(Phosphotransferase) domain 1 592 819 - -
Mtr3g4399 889 SUPERFAMILY L domain-like 83 412 - -
Mtr3g4399 889 MobiDBLite consensus disorder prediction 849 889 - -
Mtr3g4399 889 Gene3D Ribonuclease Inhibitor 32 189 IPR032675 -
Mtr3g4399 889 MobiDBLite consensus disorder prediction 851 868 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4399 Mtr-Chr3 57952186 57958107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4399 25 689 Miscellaneous Gene Families AT2G16250 56.973 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Mtr3g4399 PK_Tyr_Ser-Thr 2.6e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4399 - - gmx:100776587 1291.95