Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4397 ATGACTGCTTCTTCCAACCAAATACAACCAAACGTTGCACTTCATGGACAAAGATACATCAATTTGATTTGGACAACTTGCACTTCTATTGAGTTACGTTCATCATTCTTCATGGACAAAGATACATCAACTTCTTTGGATATTCCTCAGGAATATGAATGTGTGCCAAATTGTGATGATGAATTAAAGCCTAAGATTGGACAAGTATTTGATACATTACAAGAAGGTAAAATTTTTTACGAAAAATATGCACTCTCTATCGGATTTAGTGTGCGTTCATCATCATCGACTGTAGATAAAAACGGCGTGAAGCGTTGGAAGTATTTTGTTTGCTCGAAAGAGGGTTATTTGCCAAATAAGACGGATGATAAGGAGCAAAGTGAATCTACTGTCAAGGCTAAAAGAAGAAGGGCTTTAACAAGAGAAGGATGCAATGCAAATGTTGTTTTTAAATGGGTGGGGGAAGGTAAGTATGAGATAGCTCGATTTCATGAAAGCCACACACATCCACTTGCTTCACCTATGAAGAGACCGTTTCTAAGGTCTGCAAGGAAAGTGAATTCAAGTCACAAAAGCTTATTACTTGCATGTAGTAGAGCAAATATTGGACCTTCAAAAGCTTTCCACTTATTAAAAGAACAGCGTGGGGGTTATGAAAATGTTGGATGCACGCAGAGAGATCTTCAAAACTATTCCAGAGATTTAAAGACTTTGAATAAAGATTCTGATGCACATGTTTTGATAGACTACTTTAGAAGGAAGCAAGAAGTTAATCCATCATTTTATTATGCGTATGAGGTAGGTGAAGAAGGTCGACTGAAGCATGTTTTTTGGGCAGATGGTATTTGCAGGAAAAATTATTCCTTATTTGGAGATGTGGTTTCATTTGATACTACATATCAAACAAATAAATATCATTTGATTTTTGCACCTTTCACCAGGATAAACCATCATCGACAATCTATTACCTTCGGAGTAGGACTTATAACAAATGAGAAAAGTGATTCATTTGTATGGTTGTTTGAAAAGTTTTTGGAAGCAATGGGTGGACATAAGCCAACACTTATAATAACCGATCAAGATCCTTCCATGAAAGTGGCTATAGAAAATATTTTTGATACTTCTAATCATAGATTGTGCATGTGGCATATCATGAAAAAAGTTTCTGAAAAAGTAGGTGTTTCCACGAATGACGATGATGAGTTTAACAAAAGCTTCAAGTCATGTGTTTGGGGTTCAGAGACACCAAATGAGTTTGAAGAGACTTGGGCGTTTTTGATGACAAGGTTTGAGTTAGAAAAGAATAAATGGTTGTTGCATATGTTTGATATTCGAAGCATGTGGATCCCAGCATACTTCAAAGATTTTATGGCACTAAAGGCCTCAACATAA 1392 0.3606 MTASSNQIQPNVALHGQRYINLIWTTCTSIELRSSFFMDKDTSTSLDIPQEYECVPNCDDELKPKIGQVFDTLQEGKIFYEKYALSIGFSVRSSSSTVDKNGVKRWKYFVCSKEGYLPNKTDDKEQSESTVKAKRRRALTREGCNANVVFKWVGEGKYEIARFHESHTHPLASPMKRPFLRSARKVNSSHKSLLLACSRANIGPSKAFHLLKEQRGGYENVGCTQRDLQNYSRDLKTLNKDSDAHVLIDYFRRKQEVNPSFYYAYEVGEEGRLKHVFWADGICRKNYSLFGDVVSFDTTYQTNKYHLIFAPFTRINHHRQSITFGVGLITNEKSDSFVWLFEKFLEAMGGHKPTLIITDQDPSMKVAIENIFDTSNHRLCMWHIMKKVSEKVGVSTNDDDEFNKSFKSCVWGSETPNEFEETWAFLMTRFELEKNKWLLHMFDIRSMWIPAYFKDFMALKAST* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4397 463 Pfam MULE transposase domain 293 387 IPR018289 -
Mtr3g4397 463 Pfam FAR1 DNA-binding domain 79 172 IPR004330 -
Mtr3g4397 463 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 47 456 IPR031052 GO:0006355
Mtr3g4397 463 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 47 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4397 Mtr-Chr3 57919639 57921419 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr3g4397 MULE 2.8e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4397 - - cqi:110709295 476.092