Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4371 ATGACTCGTCCTTTCAGATTTCTCGGCGAGCTCAACTCGTCTTCCTCCGATTCACCTGAGTCATCCACCGTCGTTGATTCCGATTTCGTCGTCATCCTCGCTGCTCTTCTCTGTGCTCTCATCTGCGTTCTAGGTCTTGTTGCCGTCACCCGCTGCGGTTGTCTCCGCCGCCTACGTCTCTCCTCAACCACAAACAACACTTCTCCAGCTGCACCTCCAGCTGCCGCCAACAAAGGCGTCAAGAAGAAGGTTCTCCGTTCTCTTCCAAAGCTCACAGCAACAGAGGAATCCGCCGTGAAATTCTCTGATTGTGCTATCTGTTTAAGCGAATTCACCGCAGGAGATGAAATCCGAGTGTTGCCTCAGTGCGGCCATGGCTTTCATGTGTCTTGTATTGATTTATGGCTCAGATCTCATTCATCATGTCCTTCCTGCCGTCAGATTCTGGTAGTTTCTAGATGCGATAAGTGCGGCGGGATTCCTCCTCCCGCCACAACTACGACGGCCGGCTCCAGCTCTACGGCGGCACCGGCGCCAGATTGTGAAGGTAGATTAAAGTGTAAAAAGGTTATATAA 576 0.5174 MTRPFRFLGELNSSSSDSPESSTVVDSDFVVILAALLCALICVLGLVAVTRCGCLRRLRLSSTTNNTSPAAPPAAANKGVKKKVLRSLPKLTATEESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDLWLRSHSSCPSCRQILVVSRCDKCGGIPPPATTTTAGSSSTAAPAPDCEGRLKCKKVI* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4371 191 PANTHER RING-H2 FINGER PROTEIN ATL8 1 179 - -
Mtr3g4371 191 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Mtr3g4371 191 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 179 - -
Mtr3g4371 191 Pfam Ring finger domain 103 146 IPR001841 -
Mtr3g4371 191 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 150 IPR013083 -
Mtr3g4371 191 SMART ring_2 104 145 IPR001841 -
Mtr3g4371 191 CDD RING-H2_PA-TM-RING 103 146 - -
Mtr3g4371 191 SUPERFAMILY RING/U-box 86 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4371 Mtr-Chr3 57637725 57638984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4371 5 157 C3H Transcription Factor Family AT1G20823 66.667 3.47e-67 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4371 - - gmx:100794614 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4371 3 57637725 57638984 Mtr3g4371 3 57637725 57638984 ECH