Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4362 ATGAATGATATAATATTACAGACAGACAGTGTTGAACGTGAACCACACTCCCATTCCCAGGTGTTGTTTGTTCTCATTCTCAACACCAAATACCATTTTTCACTCTTCAGACCAACCGACATAATAACACTTGATATGAATTTTTATTATTACTGGCTGTGGCTGGTGTTTCTGTTTATGCTCCCCTATTTGGAACAAGTTTATTCAAATTCAAGACCCTCTTTTGTAAATATTGGTGCTATCTTCACCTTTGATTCTTCCATTGGTAAAGTTGCTAAACTTGCCATGGAACAAGCCGTTAAAGATGTCAACTCCAATTCCTCCATTCTTCATTCCACTCAACTTGTTCTTCATATGCAAACTTCCAATTGCAGCGGTTTCGATGGCATGATTCAAGCTTTGCGGTTCATGGAGACGGATGTAATTGCTATATTAGGTCCACAATCTTCTGTAGTTTCCCACATAGTAGCCCATGTTGCAAACGAGCTTCGTGTTCCTATGTTGTCATTTGCAGCTACAGACCCTACACTCTCATCGTTGCAGTTTCCTTTCTTTGTCAGGACAACACTCAGTGATTTGTACCAAATGACTGCAGTTGCTGAAATCATTGATTTTTATGGATGGAAAGAAGTTATTACCATTTATGTGGATGATGATTATGGACGAAATGGTGTGTCTGCGTTAGATGACGCGTTGGCAGAGAGGCGTTGTAGAATATCTTACAAAGTAGGAATCAAATCAGGACCTGATGTTGATAGGGGTGAAATCACCAATTTGCTTGTGAATGTGGCAATGATGCAGTCTCGAATTATTGTTGTCCATGCACATTCTAATTCTGGATTTATGATCTTCAAAGTGGCCCATTATCTTGGAATGATGCAGGAGGGTTATGTGTGGATAGCCACTGACTGGCTTTCCACTGTTCTAGATTCAACTTCTCTTCCTTTGGAGACAATGGATACTCTACAGGGTGCACTTGTTTTGCGCCAGCATACGCCTGATACTGATAGGAAAAAAATGTTTACCTCAAAGTGGAATAACTTAACTGGTGGTTCCTTGGGATTAAATTCTTATGGCCTGCATGCTTATGATACTGTTTGGCTGGTTGCACAAGCAATTGATAACTTTTTCAGTCAGGGTGGTGTTGTGTCATGTACCAATTACACAAGTTTGCATAGTGATAAAGCTGGTGGTCTTAACCTTGATGCAATGAGCATATTTGACAATGGAACTCTTCTGTTGAACAATATATTGCGGAGTAATTTTGTTGGATTATCAGGTCCAATAAAACTTGATTCAGAAAGATCTCTTTTTCGTCCTGCCTATGACATCATTAATGTTGTTGGAAATGGTGTTCGTCGAGTTGGCTACTGGTCTAACTATTCTGGTCTGTCAATTGTATCTCCTGAGACGTTGTATGCTAACCCACCTAATAGGTCAAGTGCAAACCAGCACCTTCACACTGTGATATGGCCTGGAGAAACAACATCCAGGCCCCGTGGATGGGTTTTCCCAAACAATGGCAAACAACTGAGAATTGGTGTGCCTATAAGAGCCAGTTACCGTGAATTTGTGTCACCAGTGAAGGGAACTGATTTGTTTAAAGGGTTCTGTGTTGATGTATTTGTGGCAGCTGTAAACTTGTTACCATATGCTGTTCCTTACCGATTTGTGCCATTCGGAGATGGCCACAAAAATCCAAGCTACACAGAATTTGTCAACAAAATAACCACTGGTTATTTTGATGGCGCTGTAGGTGACATTGCCATTGTCACAAATCGGACAAGGATTGTAGATTTTACACAGCCATATGCTGCATCTGGACTTGTTGTGGTTGCTCCTTTTAAGAAGATCAATTCCGGCGGATGGTCTTTCCTGCAGCCGTTCACTCCTTTTATGTGGATTGTGACTGCTTGTTTCTTCTTTTTTGTTGGGATAGTTGTATGGATTCTGGAACACAGGGTAAATGATGAGTTCAGGGGTTCACCTAAACAACAATTTGTAACCATATTATGGTTTAGCCTGTCAACTCTATTTTTTTCCCACAGAGAGAACACAATGAGTACTCTTGGCCGCGGTGTAGTACTCATATGGTTGTTTGTGGTTTTGATAATTAATTCCAGCTACACTGCTAGTTTAACATCCATACTCACGGTGCAGCAGTTATCTTCACGTATCAGTGGCATTGAAAGCTTAAAAGCTAGTGATGAACCAATAGGGTTTCAAGTGGGTTCATTTGCTGAACATTACTTGACTGAAGATATTGGAATATCCAGATCTAGACTTGTTCCTCTTGGATCTCCAGAAGAATATGCCAAGGCACTCCAGCTTGGTCCTAATAAAGGAGGTGTTGCTGCTATTGTTGATGAACGGCCTTATGTCGAAATATTCTTATCAACCCAATGCACATTCAGGATTGTAGGTCAGGAGTTCACCAGAAGTGGCTGGGGGTTTGCATTCCCTCGAGACTCCCCTTTGGCGGTGGATTTGTCAACTGCCATCCTACAACTTTCTGAAACTGGGGATCTGCAACGGATTCATGATAAGTGGATGACGCGAAGCACCTGTAGTTTAGATAATACTGAAATTGAATCAGATCGTCTTCAGCTCAAAAGTTTCTGGGGTCTCTTCATCATTTGCGGGGCGGCTTGCTTTATTGCTCTCGTCATATATTTTTTGCAGATTATGTTACTGGTACGACATTCCACTCCTCCCGAATCTCCTTCTAATGTTGGCCCACTTCAAAGATTTCTTTCACTCATCGACGAGAAGAAAGGTCCATCGAGGAGTGAAAGAAGAAAGAGGAATGGAGATGAAATATCACCTGAAGATCAACTGGGAAGGCAACCGAAGAGGATACAAAGAGTAATGGCAGCATAG 2880 0.4139 MNDIILQTDSVEREPHSHSQVLFVLILNTKYHFSLFRPTDIITLDMNFYYYWLWLVFLFMLPYLEQVYSNSRPSFVNIGAIFTFDSSIGKVAKLAMEQAVKDVNSNSSILHSTQLVLHMQTSNCSGFDGMIQALRFMETDVIAILGPQSSVVSHIVAHVANELRVPMLSFAATDPTLSSLQFPFFVRTTLSDLYQMTAVAEIIDFYGWKEVITIYVDDDYGRNGVSALDDALAERRCRISYKVGIKSGPDVDRGEITNLLVNVAMMQSRIIVVHAHSNSGFMIFKVAHYLGMMQEGYVWIATDWLSTVLDSTSLPLETMDTLQGALVLRQHTPDTDRKKMFTSKWNNLTGGSLGLNSYGLHAYDTVWLVAQAIDNFFSQGGVVSCTNYTSLHSDKAGGLNLDAMSIFDNGTLLLNNILRSNFVGLSGPIKLDSERSLFRPAYDIINVVGNGVRRVGYWSNYSGLSIVSPETLYANPPNRSSANQHLHTVIWPGETTSRPRGWVFPNNGKQLRIGVPIRASYREFVSPVKGTDLFKGFCVDVFVAAVNLLPYAVPYRFVPFGDGHKNPSYTEFVNKITTGYFDGAVGDIAIVTNRTRIVDFTQPYAASGLVVVAPFKKINSGGWSFLQPFTPFMWIVTACFFFFVGIVVWILEHRVNDEFRGSPKQQFVTILWFSLSTLFFSHRENTMSTLGRGVVLIWLFVVLIINSSYTASLTSILTVQQLSSRISGIESLKASDEPIGFQVGSFAEHYLTEDIGISRSRLVPLGSPEEYAKALQLGPNKGGVAAIVDERPYVEIFLSTQCTFRIVGQEFTRSGWGFAFPRDSPLAVDLSTAILQLSETGDLQRIHDKWMTRSTCSLDNTEIESDRLQLKSFWGLFIICGAACFIALVIYFLQIMLLVRHSTPPESPSNVGPLQRFLSLIDEKKGPSRSERRKRNGDEISPEDQLGRQPKRIQRVMAA* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4362 959 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 89 105 - -
Mtr3g4362 959 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 149 177 - -
Mtr3g4362 959 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 362 374 - -
Mtr3g4362 959 SUPERFAMILY Periplasmic binding protein-like I 72 503 IPR028082 -
Mtr3g4362 959 PANTHER GLUTAMATE RECEPTOR 3.3 59 957 - -
Mtr3g4362 959 CDD GluR_Plant 509 850 - -
Mtr3g4362 959 Gene3D - 506 620 - -
Mtr3g4362 959 Pfam Bacterial extracellular solute-binding proteins, family 3 534 852 IPR001638 -
Mtr3g4362 959 Gene3D - 799 858 - -
Mtr3g4362 959 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 59 957 - -
Mtr3g4362 959 PIRSF IGluLR_plant 45 958 IPR017103 -
Mtr3g4362 959 SMART GluR_14 512 853 IPR001320 GO:0015276|GO:0016020
Mtr3g4362 959 Pfam Ligand-gated ion channel 853 884 IPR001320 GO:0015276|GO:0016020
Mtr3g4362 959 MobiDBLite consensus disorder prediction 922 950 - -
Mtr3g4362 959 MobiDBLite consensus disorder prediction 920 959 - -
Mtr3g4362 959 Gene3D - 94 439 - -
Mtr3g4362 959 Gene3D - 191 464 - -
Mtr3g4362 959 CDD PBP1_GABAb_receptor_plant 77 467 IPR044440 -
Mtr3g4362 959 Pfam Receptor family ligand binding region 93 449 IPR001828 -
Mtr3g4362 959 PRINTS Metabotropic glutamate GPCR signature 144 170 IPR000337 GO:0004930|GO:0007186|GO:0016021
Mtr3g4362 959 PRINTS Metabotropic glutamate GPCR signature 176 195 IPR000337 GO:0004930|GO:0007186|GO:0016021
Mtr3g4362 959 PRINTS Metabotropic glutamate GPCR signature 195 211 IPR000337 GO:0004930|GO:0007186|GO:0016021
Mtr3g4362 959 PRINTS Metabotropic glutamate GPCR signature 211 228 IPR000337 GO:0004930|GO:0007186|GO:0016021
Mtr3g4362 959 Gene3D - 621 750 - -
Mtr3g4362 959 SUPERFAMILY Periplasmic binding protein-like II 486 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4362 Mtr-Chr3 57577291 57582256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4362 52 938 Ion Channels AT1G42540 63.082 0.0 1202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4362 K05387 - gmx:102661260 1457.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4362 3 57577291 57582256 Mtr3g4362 3 57577291 57582256 ECH