Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4348 ATGAGTTGTTATTCTTGCTTTGTTTCTCGGAAAAAAGATGTTAGCAGAATTGAAGTTGATAATAGTTCTCGATCTGCTCATACTTTAGGGAATGGAGGAACAAATGCAACAGAGGAAAAGGGGAAGAGTGTGAGGACTGGTAAAAGCAGTACTGCAGCAGCTAGTTTTGGTTTTAGAGAGCTTGCGACAGCGACCAGGGGTTTTAAGGAAGCTAATTTGATTGGAGAAGGAGGTTTTGGAAAAGTATTTAAGGGTCGTCTTTCGACCGGCGAGCTTGTTGCTGTGAAACAATTAAGTCATGATGGTCGTCAAGGTTTTCAGGAATTTGTGACTGAGGTTCTTATGTTAAGCTTGCTACATCATTCTAATCTGGTTAAGTTAATTGGCTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCTATGGGATCTCTCGAAGATCATCTTTTTGATCTTCCCCAAGACAAAGAACCTCTAAGCTGGAGTTCTCGAATGAAGATTGCTGTTGGAGCAGCTCGTGGCCTTGAGTATCTCCACTGTAAAGCAGATCCGCCTGTCATATATCGAGACTTAAAATCTGCAAACATCTTATTAGACAGCGACTTCAGCCCAAAACTGTCAGATTTTGGGCTTGCTAAGCTAGGACCTGTTGGAGACAACACCCATGTTTCAACGAGAGTGATGGGTACATATGGCTACTGCGCGCCAGAATATGCGATGAGTGGCAAATTAACTCTTAAGTCTGATATCTACAGCTTTGGTGTGGTTTTGTTGGAGTTGATTACTGGACGAAGGGCAATAGATGCTAGTAAAAAACCAGGAGAGCAAAACTTAGTTTCATGGTCTCGCCCATATTTCAGTGACCGGAGAAAGTTTGTACATATGGCTGATCCTCTTTTGCAAGGACACTTCCCTGTCCGCTGTTTGCATCAAGCAATTGCTATAACTGCTATGTGTCTCCAAGAGCAACCAAAATTCCGTCCACTCATTGGTGATATTGTCGTAGCACTGGAATACCTAGCTTCGCAGAGTCAGAATATCCCTGAAGTCCATAGACACGGTGTGCGTAGCCCACCGCAGCAACCACCTTCCAAAATGGACAGAAATTAA 1122 0.4323 MSCYSCFVSRKKDVSRIEVDNSSRSAHTLGNGGTNATEEKGKSVRTGKSSTAAASFGFRELATATRGFKEANLIGEGGFGKVFKGRLSTGELVAVKQLSHDGRQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDLPQDKEPLSWSSRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDSDFSPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDASKKPGEQNLVSWSRPYFSDRRKFVHMADPLLQGHFPVRCLHQAIAITAMCLQEQPKFRPLIGDIVVALEYLASQSQNIPEVHRHGVRSPPQQPPSKMDRN* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4348 373 Gene3D Transferase(Phosphotransferase) domain 1 144 359 - -
Mtr3g4348 373 CDD STKc_IRAK 74 342 - -
Mtr3g4348 373 Pfam Protein kinase domain 69 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4348 373 SMART serkin_6 68 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4348 373 SUPERFAMILY Protein kinase-like (PK-like) 50 342 IPR011009 -
Mtr3g4348 373 PIRSF ILK 29 355 - -
Mtr3g4348 373 PANTHER OS07G0668900 PROTEIN 21 361 - -
Mtr3g4348 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Mtr3g4348 373 ProSitePatterns Protein kinases ATP-binding region signature. 74 96 IPR017441 GO:0005524
Mtr3g4348 373 Gene3D Phosphorylase Kinase; domain 1 38 143 - -
Mtr3g4348 373 ProSiteProfiles Protein kinase domain profile. 68 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4348 373 MobiDBLite consensus disorder prediction 21 48 - -
Mtr3g4348 373 PANTHER OS07G0668900 PROTEIN 21 361 - -
Mtr3g4348 373 MobiDBLite consensus disorder prediction 19 48 - -
Mtr3g4348 373 MobiDBLite consensus disorder prediction 352 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4348 Mtr-Chr3 57453355 57457038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4348 1 346 Glycoside Hydrolase AT3G07070 58.939 7.91e-152 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Mtr3g4348 Pkinase 8.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4348 - - gmx:100796595 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4348 3 57453355 57457038 Mtr3g4348 3 57453355 57457038 ECH