Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4347 ATGGGAAACTGTTTGGCAAATTCAGGTGATGGCAAGAAGACTCAGAAAAAGACTACTTCTACCTATAAACAACGGAACAATACTTATTCTGCAGATTATGAGAGAAGTGTTGGCGCCAAAATCGCGGTAGCGGAGAAGGAAAATGGAGAGAGCCTGAGAACTACAGTAGCTGGTGGTGGAAAAATTGTGAAGCCGAATCTAAAAATGTTCACATTGGATGAGTTGAAAAGTGCGACAAGAAACTTCAGACCAGACACAATACTTGGTGAGGGTGGTTTTGGTCGTGTTTTCAAAGGATGGATTGACAAAAACACTTTCAGACCATCCAAAGTTGGTGTTGGAATTCCTGTTGCTGTCAAAAAGTCTAGCGCCGATAGTCTCCAAGGTTTACAAGAATGGCAGAGTGAAGTGGACTTTTTGGGGAAGTTCTCTCATCCGAATCTTGTTAAACTACTTGGCTACTGTTGGGAGGAAAATCAATTCCTGCTGGTTTACGAGTACATGCAAAAGGGCAGCTTGGAAAGCCACCTCTTCAGAAGCCCTGAACCACTGTCTTGGGAAATAAGGTTGAAGATAGCCATAGGAGCTGCTAGAGGTTTGGGTTTCTTACACACTTCAGAAAAATCAGTTATATATAGAGACTTCAAGTCTTCAAACATTTTGCTTGATGGGGATTTCAATGCAAAGTTGTCTGACTTTGGATTGGCAAAGCTTGGACCTGTCAACGGTAGATCACATGTAACCACACGGATCATGGGTACCTATGGTTATGCAGCACCTGAATACATGGCTACAGGTCATCTCTATGTAAAAAGCGATGTATATGGATTTGGTGTTGTTCTTCTAGAAATATTAACAGGTTTAATAGCATTGGACCAAAATAGGCCAACGAATGAGATGAATTTGGTGGATTTTACAAGGGGGTCTCTAAGTGACAAAAAGAAACTAAAAAAGATAATGGATCCAGGGTTGGAAGAGCAATATTCATCAACAGCAGCATTTCTAATAGCTCAACTCATACTCAAATGTTTAGAATCTGACCCAAAAAATAGACCATCTATGGAACAAGTCTTGGAAACTCTAGAAAAGGCTCAATCCATTAAATATAAACCCAAAGTGAAAAAATCCAGAAATTCTGTGCATCAAAAAAATAAGAGACCAAGGGATCATTCTACCAATAATCATCACAATAATGGTCACTCCAAATCACAAACTCATTCCACTCAATAG 1230 0.3984 MGNCLANSGDGKKTQKKTTSTYKQRNNTYSADYERSVGAKIAVAEKENGESLRTTVAGGGKIVKPNLKMFTLDELKSATRNFRPDTILGEGGFGRVFKGWIDKNTFRPSKVGVGIPVAVKKSSADSLQGLQEWQSEVDFLGKFSHPNLVKLLGYCWEENQFLLVYEYMQKGSLESHLFRSPEPLSWEIRLKIAIGAARGLGFLHTSEKSVIYRDFKSSNILLDGDFNAKLSDFGLAKLGPVNGRSHVTTRIMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEILTGLIALDQNRPTNEMNLVDFTRGSLSDKKKLKKIMDPGLEEQYSSTAAFLIAQLILKCLESDPKNRPSMEQVLETLEKAQSIKYKPKVKKSRNSVHQKNKRPRDHSTNNHHNNGHSKSQTHSTQ* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4347 409 CDD STKc_IRAK 88 363 - -
Mtr3g4347 409 MobiDBLite consensus disorder prediction 1 27 - -
Mtr3g4347 409 Pfam Protein tyrosine and serine/threonine kinase 86 361 IPR001245 GO:0004672|GO:0006468
Mtr3g4347 409 SUPERFAMILY Protein kinase-like (PK-like) 67 385 IPR011009 -
Mtr3g4347 409 ProSiteProfiles Protein kinase domain profile. 82 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4347 409 ProSitePatterns Protein kinases ATP-binding region signature. 88 121 IPR017441 GO:0005524
Mtr3g4347 409 MobiDBLite consensus disorder prediction 370 384 - -
Mtr3g4347 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Mtr3g4347 409 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 33 386 - -
Mtr3g4347 409 PANTHER OS01G0588500 PROTEIN-RELATED 33 386 - -
Mtr3g4347 409 Gene3D Phosphorylase Kinase; domain 1 66 167 - -
Mtr3g4347 409 MobiDBLite consensus disorder prediction 368 409 - -
Mtr3g4347 409 Gene3D Transferase(Phosphotransferase) domain 1 168 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4347 Mtr-Chr3 57442313 57446284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4347 68 361 Glycoside Hydrolase AT3G07070 47.987 1.40e-91 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr3g4347 PK_Tyr_Ser-Thr 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4347 - - aprc:113865973 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4347 3 57442313 57446284 Mtr3g4347 3 57442313 57446284 ECH