Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4316 ATGGGAGACACAGAGAGTTGTTGCAATATCAAAGCTATCAGTTCTGAATGGAATCAAAATGGAAAGCAGAAACAAAAGATTGAAGTTTACCTCAAAGTTCTTAGTCGACTTAGGGAATTGAATGTTCCTGAGATTATGGCTCCCGGTTTTGAGGATGATCTTTGGGCGCATTTCTATCGTCTTCCCACTAGGTATGCATTGGATATGAATGTGGAGAGGGCTCAATATGTCCTTATGCATAAAAGGTTACTGCACATTGCACGAACCCCAGCTGCATCTACTGGACCTGCAGTTGAAGTCCGTCTTGTACAAGTGGTTTGCTCTGCTTCTGGGGTGACTTGTAAATCCCTTCATTCAAATTCACAAAATAAAGTGAGTCCTCAAGATTCTGATATTCAGGGCAACATGATGAGGCCTATGCATGAAATCACAATTTCAACAAATGACAAGCCAAAACTTCTTAGTCAGTTGACTTCCTTATTGTCTGAGACTGGGCTGGACATTCAAGAAGCACATGCTTTTTCGACATTGGATGGCTATTCATTGGATGTTTTTGTTGTTGGTGGTTGGGCAGTTGAGGAGACAGAAAAGTTAAAGCATGTACTAGCTAACAAAATTCAGAAACTAGAGAAGCAGTCTCAGTTGAAAGAAAATGGCAGTCCTCCTCTTGCAAAGCTTGCAGAGCAAGAGAAAATTAGGATGAACTTTATATCTAGACATGTAATTTTTCCCACCCGTGAAAACGGCGTCTCAACAAGTGAAGCAAGTTGGTTGAGATTTGAAAAGAAAATTGCATCTGGACCGTTCAGTGATTTGTACAAAGGTACATTATGTAATCAAGATTTAGCTATCAAAGTCCTGAAGCAAGAGAGTTTGGATGAAAATATACATAGGGAGTTTTCTCAGGAAGTATATATCCTAAGTAAAATTCAGCACAGGAATGTTGTCAAATTTGTTGGTGCATGTACAAAACCCCCAAACCTCTGCCTTGTCACAGAATATTTGTCTGGTGGAAGTATGTACGACCTTCTTCATAAACAGAAAACTGTCCTTGCTCTTCCATCTTTGCTAAAAGTAGCCATTGATGTTTCTGAAGGGATGAAATATTTGCATCAGAATGATATCATACACCGGGACCTCAAGTCAGCTAATCTTTTGATAGATAAGACTGGAGTTGTTAAGGTTGCTGATTTTGGTGTAGCCAGAGTGCGCAATCGTTCTGGTATAATGACTGCAGAGACCGGAACATATCGGTGGATGGCTCCAGAGGTTATTGAGCATAAACCATATGATCACAAAGCTGATGTCTTTAGCTTTGCAATTGTTCTCTGGGAGCTGCTTACAAGAAAGCTTCCTTATGAGCATTTGTCCCCATTGCAAGCAGCAGTTGGAGTGGTCCAGAAGGGTTTAAGGCCCAAAATTCCAAGGCATTGTCATCCAAAGTTGGTGGAATTGCTTCAGTGGTGCTGGCAGCAAGATCCATCTTTGAGACCCAGTTTTTCAGAAATTTTGGAATTTTTGCTGCACATTTCCAAGATGGTATGTCAGGCCGTTCCTGATGAGATGATGAATGTCATTTGA 1581 0.408 MGDTESCCNIKAISSEWNQNGKQKQKIEVYLKVLSRLRELNVPEIMAPGFEDDLWAHFYRLPTRYALDMNVERAQYVLMHKRLLHIARTPAASTGPAVEVRLVQVVCSASGVTCKSLHSNSQNKVSPQDSDIQGNMMRPMHEITISTNDKPKLLSQLTSLLSETGLDIQEAHAFSTLDGYSLDVFVVGGWAVEETEKLKHVLANKIQKLEKQSQLKENGSPPLAKLAEQEKIRMNFISRHVIFPTRENGVSTSEASWLRFEKKIASGPFSDLYKGTLCNQDLAIKVLKQESLDENIHREFSQEVYILSKIQHRNVVKFVGACTKPPNLCLVTEYLSGGSMYDLLHKQKTVLALPSLLKVAIDVSEGMKYLHQNDIIHRDLKSANLLIDKTGVVKVADFGVARVRNRSGIMTAETGTYRWMAPEVIEHKPYDHKADVFSFAIVLWELLTRKLPYEHLSPLQAAVGVVQKGLRPKIPRHCHPKLVELLQWCWQQDPSLRPSFSEILEFLLHISKMVCQAVPDEMMNVI* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4316 526 ProSiteProfiles Protein kinase domain profile. 258 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4316 526 CDD STKc_MAP3K-like 264 507 - -
Mtr3g4316 526 Pfam Protein tyrosine and serine/threonine kinase 258 507 IPR001245 GO:0004672|GO:0006468
Mtr3g4316 526 Coils Coil 192 212 - -
Mtr3g4316 526 PRINTS Tyrosine kinase catalytic domain signature 332 345 IPR001245 GO:0004672|GO:0006468
Mtr3g4316 526 PRINTS Tyrosine kinase catalytic domain signature 369 387 IPR001245 GO:0004672|GO:0006468
Mtr3g4316 526 PRINTS Tyrosine kinase catalytic domain signature 415 425 IPR001245 GO:0004672|GO:0006468
Mtr3g4316 526 PRINTS Tyrosine kinase catalytic domain signature 434 456 IPR001245 GO:0004672|GO:0006468
Mtr3g4316 526 PRINTS Tyrosine kinase catalytic domain signature 478 500 IPR001245 GO:0004672|GO:0006468
Mtr3g4316 526 SUPERFAMILY Protein kinase-like (PK-like) 255 507 IPR011009 -
Mtr3g4316 526 Gene3D Phosphorylase Kinase; domain 1 253 336 - -
Mtr3g4316 526 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 136 - -
Mtr3g4316 526 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 135 511 - -
Mtr3g4316 526 Gene3D Transferase(Phosphotransferase) domain 1 337 524 - -
Mtr3g4316 526 SMART serkin_6 258 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4316 526 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 9 136 - -
Mtr3g4316 526 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 135 511 - -
Mtr3g4316 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 375 387 IPR008271 GO:0004672|GO:0006468
Mtr3g4316 526 SUPERFAMILY ACT-like 137 212 IPR045865 -
Mtr3g4316 526 ProSiteProfiles ACT domain profile. 142 222 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4316 Mtr-Chr3 57079933 57085885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4316 3 514 MAP Kinase Kinase Kinase AT4G35780 53.552 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mtr3g4316 PK_Tyr_Ser-Thr 1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4316 - - aprc:113864606 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4316 3 57079933 57085885 Mtr3g4316 3 57079933 57085885 ECH