Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4281 ATGAGAGGACTCAGTGGAACAATATCCGTCGCCAGAGCCTTAAGAGCCAATTCCACCGCCGCTTCCACCTTCCTCCGACCGCCTCGAGCAGCTTCCTATGCCGTCACATATTGGACCACATCCAACCCTCAAAATCTCGTTGATCGCTCCAACCTATCAACTCCCTCTGTTATTCGCAGCGACGTCATCGGATTTAGGCATTACGGTTCTGCCGCCGCCGCATCTCCGGCGGAACAAGACCTCAAACCAAGAATCTCAGAACAAAATAGCTTCAATCCAAAAGAAGTTGTTCTCTTTCAATACGAAGCTTGTCCCTTCTGCAACAAGGTTAAAGCGTTTCTAGATTATCATGGTATTCAGTACAAAGTGGTAGAAGTAAATCCTACGAACAAGAAAGAGATTAATTGGTCTCATTACAAGAAGGTGCCTATTGTCATCGTTGATGGTGAACAGTTGGTTGATTCTTCAGACATAATTGATAAGTTGGTCAAAAGGATACATCCAGATTATGACTTGAATGCAGATGAAGAGAAGAAGTGGCGCGAGTGGGTAGATAATCACTTGGTGCATGTTTTGTCGCCAAACATATATCGAACTGTTTCAGAAGCTCTTGAATCATTTGATTATATCACTACTAAAGGCAATTTCAGTTTATATGAGAGGTTAGTGGCTAAGTATGGTGGGGCTGCTGCCATGTATTTCGTGTCGAAGAAATTGAAGAAGAGACACAATATCACTGATGAGCGTCAGGCTTTGTATGGAGCTGCTGAACAGTGGGTTGATGCTTTGAAGGGCCGAAAATTTCTTGGTGATTTGGAACCTAATTTAGCCGATCTTGCTGTCTTTGGTGTTCTAAGACCCATTCGCCACCTCAAGTCAGGTCGAGATATGGTAGAGCACACAAGGATTGGAAATTGGTTTTCTGAGATGGAAAATGCAGTAGGACAGGCTTCCAGAATGAGTGCATAA 969 0.4386 MRGLSGTISVARALRANSTAASTFLRPPRAASYAVTYWTTSNPQNLVDRSNLSTPSVIRSDVIGFRHYGSAAAASPAEQDLKPRISEQNSFNPKEVVLFQYEACPFCNKVKAFLDYHGIQYKVVEVNPTNKKEINWSHYKKVPIVIVDGEQLVDSSDIIDKLVKRIHPDYDLNADEEKKWREWVDNHLVHVLSPNIYRTVSEALESFDYITTKGNFSLYERLVAKYGGAAAMYFVSKKLKKRHNITDERQALYGAAEQWVDALKGRKFLGDLEPNLADLAVFGVLRPIRHLKSGRDMVEHTRIGNWFSEMENAVGQASRMSA* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4281 322 CDD GST_C_mPGES2 170 315 IPR034335 -
Mtr3g4281 322 SFLD Prostaglandin E synthase like.1 38 320 IPR034334 GO:0050220
Mtr3g4281 322 Pfam Glutathione S-transferase, N-terminal domain 98 164 IPR004045 -
Mtr3g4281 322 SFLD Prostaglandin E synthase like 38 320 - -
Mtr3g4281 322 SUPERFAMILY Thioredoxin-like 95 188 IPR036249 -
Mtr3g4281 322 Gene3D Glutaredoxin 84 167 - -
Mtr3g4281 322 SUPERFAMILY GST C-terminal domain-like 174 314 IPR036282 -
Mtr3g4281 322 Gene3D - 172 320 - -
Mtr3g4281 322 PANTHER GLUTATHIONE S-TRANSFERASE FAMILY PROTEIN 1 321 - -
Mtr3g4281 322 ProSiteProfiles Glutaredoxin domain profile. 84 183 - -
Mtr3g4281 322 ProSitePatterns Glutaredoxin active site. 98 114 IPR011767 -
Mtr3g4281 322 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 94 171 IPR004045 -
Mtr3g4281 322 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4281 Mtr-Chr3 56677798 56680487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4281 66 178 Glutathione S-transferase Gene Family AT5G16710 31.304 1.00e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4281 K05309 - gmx:100804696 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4281 3 56677798 56680487 Mtr3g4281 3 56677798 56680487 ECH