Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4253 ATGTCTGCACTGTTTACAGATATGGTTGTTTTGGTTGATGCCCCAAATGTTGATCCACCTGAGATTGAACATCCTAATGTGTTGTCTCTTCTTTTACTTGAAGATGCGCATGATTCCGGTAATGCCAAATCCGAGAATCCCCCATCACCGCCACCAAAACTTGAAATTTGTCTAGGAAATTTGAAAGCAAAGGATGGTCCTCCTCCTATTCCTCCTGTTGTACCACCTCCAGTTGTTGCTTGGGTTGGAGAGAAAGCTAGAAAGCTTGGTTTTTCCACTGTTATTGGTAAATCCGATAACGGTAGCAATGGAAGAAGCGCATTTGTTACTTTGATATGTGAAAGAGGGGGTTCATACACCGAGTACAAGAGAAAGAGTCGGCGCGAGATAGCTGCTTCGGTTAAATGCAAGTGTCCGTTTCGGCTGAGAGGTTACTTGTGTGGTGGTGGTGATTGGAGCCTTAAAGTTGGTGATGGTAAACACAACCATGACATGACAGATGTGTTGAAAGGTCATAAAACCGCCGTTCTAAACCCAAATGAACGTGTTCACCTTGAAAAGATGGTGGATTCAAACGTTCCTCCGAGGCAAATGCTTACCAACTTAAAGAAGAGGAACCGTACCACTTCAACTACTATCAAACATGTTTATAATGCTTCTTATAGGTATAGGCGGTTCATTAGGGGTACGAGGAATGACATGCAACATCTCTTGAAGTCTTTGGTTGATAATGGTTACGTTTATCATTGTAGGAAGTATCCTGATTCTGAGGTTGTCAGTGATGTGTTTTGGGCACATCCAGATTCTATCAAGTTGTTTAACACATTCTCCACGGTGCTTGTGTTGGATTCAACATACAAGACAAACAAGTATCGTCTTCCATTGCTTGAGTTTGTCGGTAACACATATACCATGAAAACATTCTCTATTGCTTTTGCCTATATGATGTCTGAGAGGCAAGACAATGTTTATTGGGCTCTTGAGAGGTGTCGTGAGATGTTGCACTCCAAAGATCTCTATCTCAAAGTAGTTGTCACCGATCGAGACAATGCTTTGATCAATGCTGTGGAAAAGGTTTTCCCTAAAGCTGCTACTTTGTTGTGCTCATATCACATTGGACAAAATGTGAGAGCAAAGTGTAAATTGGATTGCAAAGTGACGGATCTCAAAGGCAAGAATGAGAAAGCGATTAAGCCTGGTTCGGTGGTGAAGACTATGATGGCTGCATGGGTGGATATTGTGGACTCCAAAACGGAGGAAGTATACATTGATAATTGGACCCGGTTCAAAGTTATATGCGCAAAATTTCCCAAGTTTTTGAAATATGTTGAAAAGACAATTTTGGATCCGGTCAAGGAGAAGTTTGTGAGGTTTTGGGTTGACAAAAACCTTCATATGGGGAATACTACAACAAACAGAGCTGAATCTGCAGACGCTCGGTTGAAAAAGCATTTGAGTAGTAGTATGGGTGATTTGAGTACAAACTGGAAATCCGTTTGTAACATGCTAGAGTTGCAACATACCGCAATACATGCTTCATTTCAGACGAGCATAATAATGCTTGAACATAGGTTCAAAGGAAAGATGTTGTGGTCTAATTTGATCCGGAACATTTCAAGGGAAGCATTACATCATCTCGTAGTGGAGTACAATAAAGCAATTGAAATTGGTACAGATAAATCAAAATGTGGTTGTTTGAGTTTGATCACTTACGGATTACCGTGTGGTGCTCAGTTCAAGAACGTCGATTACAACATGAAGTTGCATTTAAAGGAACAATTTCGACAATTTGTTTTACCAGACACCACCTTTATGCGTCCACCGCCAAATAAGGTCACCACCAAATGA 1848 0.4102 MSALFTDMVVLVDAPNVDPPEIEHPNVLSLLLLEDAHDSGNAKSENPPSPPPKLEICLGNLKAKDGPPPIPPVVPPPVVAWVGEKARKLGFSTVIGKSDNGSNGRSAFVTLICERGGSYTEYKRKSRREIAASVKCKCPFRLRGYLCGGGDWSLKVGDGKHNHDMTDVLKGHKTAVLNPNERVHLEKMVDSNVPPRQMLTNLKKRNRTTSTTIKHVYNASYRYRRFIRGTRNDMQHLLKSLVDNGYVYHCRKYPDSEVVSDVFWAHPDSIKLFNTFSTVLVLDSTYKTNKYRLPLLEFVGNTYTMKTFSIAFAYMMSERQDNVYWALERCREMLHSKDLYLKVVVTDRDNALINAVEKVFPKAATLLCSYHIGQNVRAKCKLDCKVTDLKGKNEKAIKPGSVVKTMMAAWVDIVDSKTEEVYIDNWTRFKVICAKFPKFLKYVEKTILDPVKEKFVRFWVDKNLHMGNTTTNRAESADARLKKHLSSSMGDLSTNWKSVCNMLELQHTAIHASFQTSIIMLEHRFKGKMLWSNLIRNISREALHHLVVEYNKAIEIGTDKSKCGCLSLITYGLPCGAQFKNVDYNMKLHLKEQFRQFVLPDTTFMRPPPNKVTTK* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4253 615 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 135 543 IPR031052 GO:0006355
Mtr3g4253 615 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 135 543 - -
Mtr3g4253 615 Pfam MULE transposase domain 279 375 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4253 Mtr-Chr3 56389006 56391345 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr3g4253 MULE 1.5e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4253 - - mtr:MTR_1g099140 780.785