Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4241 ATGGCAACAACGGCTATATTTCTCACCTTCATTGCATTAACCTTAACACATTCAGCAGCTGCAGCAACACAAATCAACTCATCTCATTCCGAAATCCAAGCCTTAACAATCTTCAAACTAAACCTTCTTGACCCACTCAATGCCTTAACAACTTGGGATCCATCAACACCTTCAGCACCATGTGATTGGCATGGCATTCTCTGTTACAACAACAATAACAGAGTTCACACTATACGTTTACCTCGTCTTCAACTCACTGGTTCAATATCTTCATCACTCTCTAATCTCTCACAGCTTCGTAAACTTAGTCTCCATTCCAACAACCTTAACTCATCAATACCTTCTTCTCTTTCTCATTGTCTCTTCCTACGTGCTGTTTATCTTCACAACAACTCTCTCTCTGGTTATCTCCCTCCTTCACTTCTCACCCTCACCAATCTTCAAATTCTCAACCTTGCTCGTAACTTTCTCTCTGGTACAATACCAAATAATCTCTCTAACTCCCTAAGGTTTCTTGATCTTTCTTCTAACTCATTCTCCGGCAACATTCCGGGGAACTTTTCGTCCAAATCTCACCTTCAGCTCATCAATCTTTCACATAATGACTTCACCGGTGGAATACCGTTTACTGTCGGAGCATTACAGCATTTGGAGTATCTGTGGTTAGACAGCAACCATCTTCATGGAACGTTACCTTCTGCTGTTGCAAACTGTTCTTCTATGGTGCACCTTAGTGCAGAGGATAATTTCATTGGTGGGTTCGTTCCTTCCACGATAGGGACTATGCCAAAGCTTCAAGTGCTGTCACTTTCCAGGAATCAACTTTCTGGTTTTGTCCCCACAACACTGTTTTGCAATGAAGACAACAACAATAATAACAATGCTACTAATCTTCGTATTGTTCAACTTGGGTTTAATAGGATCACGGGTATTTCAAACCCTCAAAATGGAAAATGTATTGATTATTTCTTGGAGATTTTAGACCTTAAAGAGAATCACATTATTCACACTTTGTTTCCTTCTTGGTTGACCAATGTGAAATCTTTGAAGGGTCTTGATCTCTCTGGAAACTCATTTTCAGGTGTTCTGCCTCAAGATATTGGAGATCTTTTTTTGTTAGAAGAGTTAAGGCTTTCTGATAATTTGTTATCTGGTGTTGTTCCAAGTAGCATTGTTAAATGTAGGTTGTTGAAGGTTCTTTATCTTCAAAGAAATCGATTATCAGGTCTCATTCCTTATTTTCTTGGTGAATTGAAAAGTTTGAAGGAGTTATCTCTTGGTGGTAACTATTTTACTGGTTCAATTCCAAAAAGTTATGGAATGCTTAATGAGTTAGAGATTTTGGATTTAAGCAACAATAAATTGAATGGGATTTTGCCTTCGGAAATCATGCAGTTAGGTAACATGAGTGTTTTGAATCTCAGCAATAATAGATTCTCCAGTCAAGTTTCGTTTCAAATTGGAGACTTGACCGCTTTGCAGGTTCTTAATTTGAGTCACTGTGGCTTTTCTGGTAGTGTTCCAGCTACATTGGGGAATTTGATGAAACTGAGAGTGTTGGATTTAAGCAAACAAAATCTTTCAGGTGAGTTACCTGTTGAGGTTTTTGGTTTACCTAGTTTGGAAGTTGTGGCACTTGATGAAAACCATTTGAATGGTTCTGTTCCTGAGGGTTTCAGCAGCATTGTTAGTCTAAAGTATCTTAATCTGAGTTCCAATGATTTTGTTGGCAGCATTCCAACAACCTATGGTTTTCTAAGTTCCTTGGTTGTTCTTTCGTTGTCTCGCAATTTCATTTCTGGTTCAATACCTAATCAGATTGGTGGTTGTTCTCAACTTGAAGTGCTTGAGCTTCAGTCAAATCGTTTAGCAGGTAACATTGTTCCAAGTGTTATCTCTAAACTTTCACGTTTAAAGGAGCTTAATTTAGGACACAATGGATTTAAAGGTGAGATCCCAGATGAGATTTCAAAGTGTTCTGCTTTGAATTCACTTGATTTGGATGGTAATCATTTTACTGGTCACATACCACAATCCTTATCAAAATTATCAAATTTGAAGACTTTGAACCTCTCTTCAAATCAATTGACAGGAGTAATTCCAGTTGGTCTTTCGCGCATTTCGGGTTTGAAGTATTTAAATGTTTCCAACAACAACCTCGACGGTGAGATTCCACCAATGCTGAGTTCTAGATTCAATGACCCATCCGTATACGCAATGAACAAGAAGTTATGTGGGAAACCATTGCATAGAGAATGTGGGAAATCAAAAAGACGAAAGAGAAAAAGACTAATCATCATCATAGGTGTTGCAGCTGCAGGACTATGTCTTTTAGCTTTGTGTTGTTGTGGCTATGTTTATAGTCTCTTAAGGTGGCGAAGAAAGCTCCGAGAAGGCGTAACAGGTGAGAAGAAACGCAGTCCAAGTGCAGGCTCAAATGGAGAAAGAAACAGTAGAGGAAGTGGTGAAAATGGAGGACCAAAACTCATAGTATTCAACAACAAAATCACATATGCTGAAACATTAGAAGCAACAAGAAACTTTGATGAAGAAAACGTTTTAAGCAGAGGAAAACATGGACTTGTTTTCAAAGCCTCATATCAAGACGGAATGGTTCTATCAATTCGTAGACTTCCAAATGGATCAACATTGATGGATGAAGCTACATTCCGCAAAGAAGCAGAATCATTAGGCAAAGTTAAGCATAGAAACTTAACAGTTTTACGTGGATATTATGCAGGACCACCACCTGATGTAAGACTATTAGTTTATGATTACATGCCAAATGGAAATTTAGGTACATTGCTTCAAGAAGCTTCACAACAAGATGGTCATGTTTTGAATTGGCCAATGCGTCATTTGATTGCATTAGGTATTGCTCGTGGCTTGGGTTATTTACACTCGGTGGAAATTGTTCATGGCGATGTTAAGCCACAAAATGTTCTTTTCGATGCTGATTTTGAAGCCCATTTATCCGAATTTGGGCTTGACCGGTTAACAATGATTAATAGTCCAATAGAAACAACTGCGTCGTCCTCAACAACGACGCCAGTTGGTTCTTTAGGCTACGTGGCACCGGAAGCAGTGTTATCTGGACAAGTAACAAAGGAAGGTGATATTTACAGTTTTGGGATAGTGTTGTTGGAGATATTGACAGGGAGAAAAGCAGTGATGTTTACACAAGATGAAGATATAGTGAAGTGGGTGAAGAAGCAGTTACAAAGAGGTTTGATTTCGGAGTTATTGGAACCTGGTTTGCTTGAGATTGATCAAGAATCATCAGAATGGGAAGAGTTTTTGTTAGGTGTTAAAGTTGCACTACTTTGCACAGCACATGATCCTCTTGATAGACCTTCTATTAATGATATTGTTTTCATGCTTGAAGGTTGTCGTGTTGGACCTGATATCCCTTCCTCTGCTGATCCCACCACACTACCTTCCCCTGCTTCTTGA 3453 0.3889 MATTAIFLTFIALTLTHSAAAATQINSSHSEIQALTIFKLNLLDPLNALTTWDPSTPSAPCDWHGILCYNNNNRVHTIRLPRLQLTGSISSSLSNLSQLRKLSLHSNNLNSSIPSSLSHCLFLRAVYLHNNSLSGYLPPSLLTLTNLQILNLARNFLSGTIPNNLSNSLRFLDLSSNSFSGNIPGNFSSKSHLQLINLSHNDFTGGIPFTVGALQHLEYLWLDSNHLHGTLPSAVANCSSMVHLSAEDNFIGGFVPSTIGTMPKLQVLSLSRNQLSGFVPTTLFCNEDNNNNNNATNLRIVQLGFNRITGISNPQNGKCIDYFLEILDLKENHIIHTLFPSWLTNVKSLKGLDLSGNSFSGVLPQDIGDLFLLEELRLSDNLLSGVVPSSIVKCRLLKVLYLQRNRLSGLIPYFLGELKSLKELSLGGNYFTGSIPKSYGMLNELEILDLSNNKLNGILPSEIMQLGNMSVLNLSNNRFSSQVSFQIGDLTALQVLNLSHCGFSGSVPATLGNLMKLRVLDLSKQNLSGELPVEVFGLPSLEVVALDENHLNGSVPEGFSSIVSLKYLNLSSNDFVGSIPTTYGFLSSLVVLSLSRNFISGSIPNQIGGCSQLEVLELQSNRLAGNIVPSVISKLSRLKELNLGHNGFKGEIPDEISKCSALNSLDLDGNHFTGHIPQSLSKLSNLKTLNLSSNQLTGVIPVGLSRISGLKYLNVSNNNLDGEIPPMLSSRFNDPSVYAMNKKLCGKPLHRECGKSKRRKRKRLIIIIGVAAAGLCLLALCCCGYVYSLLRWRRKLREGVTGEKKRSPSAGSNGERNSRGSGENGGPKLIVFNNKITYAETLEATRNFDEENVLSRGKHGLVFKASYQDGMVLSIRRLPNGSTLMDEATFRKEAESLGKVKHRNLTVLRGYYAGPPPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLGYLHSVEIVHGDVKPQNVLFDADFEAHLSEFGLDRLTMINSPIETTASSSTTTPVGSLGYVAPEAVLSGQVTKEGDIYSFGIVLLEILTGRKAVMFTQDEDIVKWVKKQLQRGLISELLEPGLLEIDQESSEWEEFLLGVKVALLCTAHDPLDRPSINDIVFMLEGCRVGPDIPSSADPTTLPSPAS* 1151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4241 1150 Gene3D Ribonuclease Inhibitor 290 483 IPR032675 -
Mtr3g4241 1150 PANTHER LRR RECEPTOR-LIKE KINASE 2 1145 - -
Mtr3g4241 1150 SUPERFAMILY L domain-like 290 553 - -
Mtr3g4241 1150 SMART LRR_typ_2 262 285 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 635 659 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 418 441 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 490 513 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 683 706 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 442 466 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 214 238 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 707 731 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 538 561 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 346 369 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 370 393 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 96 120 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 586 610 IPR003591 -
Mtr3g4241 1150 SMART LRR_typ_2 144 168 IPR003591 -
Mtr3g4241 1150 Gene3D Ribonuclease Inhibitor 584 628 IPR032675 -
Mtr3g4241 1150 ProSiteProfiles Leucine-rich repeat profile. 444 465 IPR001611 GO:0005515
Mtr3g4241 1150 Pfam Protein kinase domain 850 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4241 1150 Gene3D Ribonuclease Inhibitor 30 185 IPR032675 -
Mtr3g4241 1150 Gene3D Ribonuclease Inhibitor 484 583 IPR032675 -
Mtr3g4241 1150 PRINTS Leucine-rich repeat signature 445 458 - -
Mtr3g4241 1150 PRINTS Leucine-rich repeat signature 683 696 - -
Mtr3g4241 1150 ProSiteProfiles Protein kinase domain profile. 848 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4241 1150 Gene3D Phosphorylase Kinase; domain 1 824 926 - -
Mtr3g4241 1150 SUPERFAMILY L domain-like 490 738 - -
Mtr3g4241 1150 ProSitePatterns Serine/Threonine protein kinases active-site signature. 971 983 IPR008271 GO:0004672|GO:0006468
Mtr3g4241 1150 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Mtr3g4241 1150 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1145 - -
Mtr3g4241 1150 Pfam Leucine rich repeat 661 720 IPR001611 GO:0005515
Mtr3g4241 1150 Pfam Leucine rich repeat 324 383 IPR001611 GO:0005515
Mtr3g4241 1150 Pfam Leucine rich repeat 396 455 IPR001611 GO:0005515
Mtr3g4241 1150 Pfam Leucine rich repeat 516 575 IPR001611 GO:0005515
Mtr3g4241 1150 SUPERFAMILY Protein kinase-like (PK-like) 828 1138 IPR011009 -
Mtr3g4241 1150 Gene3D Transferase(Phosphotransferase) domain 1 927 1134 - -
Mtr3g4241 1150 SUPERFAMILY L domain-like 31 312 - -
Mtr3g4241 1150 MobiDBLite consensus disorder prediction 806 820 - -
Mtr3g4241 1150 MobiDBLite consensus disorder prediction 800 828 - -
Mtr3g4241 1150 Pfam Leucine Rich Repeat 146 167 IPR001611 GO:0005515
Mtr3g4241 1150 Gene3D Ribonuclease Inhibitor 629 755 IPR032675 -
Mtr3g4241 1150 Gene3D Ribonuclease Inhibitor 186 289 IPR032675 -
Mtr3g4241 1150 ProSiteProfiles Leucine-rich repeat profile. 685 706 IPR001611 GO:0005515
Mtr3g4241 1150 SMART serkin_6 848 1126 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4241 Mtr-Chr3 56278401 56282250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4241 6 1149 Receptor kinase-like Gene Family AT4G36180 61.752 0.0 1293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Mtr3g4241 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4241 - - gmx:100801571 1570.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4241 3 56278401 56282250 Mtr3g4241 3 56278401 56282250 ECH