Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4231 ATGGATCTTTTGCGATCAGAACCTATGCAACTTGTTCAATTGATCATTCCAATTGAATCAGCTCAGCGATCCATCTCTTACCTTGGCGATCTCGGCCTTTTTCAATTCAAAGATCTTAATGAAGATAAAAGCCCATTCCAACAGACCTACGCTTCACAGGTTAAAAGATGTGGGGAAATGTCGCGTAAGTTGCGTTTATTTAAGGAGCAAATGAAAAAGGCAAATATATCTCCGTCAACATGGTCAACAAGAGATGGTTCTATTGATCTAGAAAAATTGGAGGTTAAACTAGCAGAACTTGAAGCCGAGCTAATTGAGATTAATTCAAACAATGAGAAGTTGCAGCACACTTATAATGAACTTATAGAGTACAAGCTTGTTTTAGAGAAGGTTGGGGAGTTTTTCTCTTCGGCACAAATTAGTGCAGCAACTCGCCAGAGAGAGCTTGAAGTTCAACAACCATCTGTTGAAGGGTCTATTGACTGTCCATTATTAATGGAACAAGAGACGACAGCATATCCAGTAAAGCAGATAAAATTGGGGTTTATAACCGGTCTTGTTACTAGGGAAAAATCAATTCCTTTTGAAAGAATTCTATTTCGTGCTACTAGAGGAAATGTTTTTCTGAAGCAGGCTGTGGTTGAACATCATGTTCTAGATCCTTTGTCGGGAGAGAAGGTTCATAAAAATGTATTTATTATATTTTACTCGGGAGAGAGAGTTAAAAGTAAAATTAACAAAATTTGTGATGCTTTTGGAGCAAATCGTTATCCCTTCTCGGATGACTTGAGTAAACAATTTGAGATGATGACAGAGGTTTCGGAAAGAGTTGTAGAATTAAAGACAACCATTGATGTAGGTTTGCTTCATCGAAGCAATTTGTTGCAAACAATTGGATATAAATTTGAGCAGTGGAATCTTCTGTTGCAAAAGGAAAAGTCCATTTATCACATTCTAAATATGCTAAACATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGCTGGTGCCCTGTTTTTGCAACAAGCCAGATTCAAAAAACATTGATGCGAGCAACTATGGACTGTAACTCTCAAGTAGAGGCAATAGTTCAGGTTTTGCAGACAAATGAGTTACCACCCACCTATTTTTGCACTAACATTTTTACTTCTTCTTTTCAAGAAATTATAGACGCATATGGAATTGCCAAGTACCAGGAAGCAAATCCTGGTGTGTACACAATCATCACGTTTCCTTTCCTTTTCGCTGTAATGTTTGGTGATTGGGGTCATGGCATATGCTTATTATTGGCAACTTTGTATTTCATAATCAATGAAAAAAAGTTTTATTGTCAGAAACTTGGAGACATATTAGAAATGGTTTTTGGGGGGAGATATATTATTATGATGATGGCACTTTTCTCAATCTACACTGGGTTAATATATAATGAATTCTTCTCCATTCCGTTTGAACTATTTGGACAATCTGCCTATGGATGTCGCGATCCTACATGCAGGGATGCTACTACAATAGGTTTGGTAAAAGTGCGCGACACTTATCCATTTGGCGTAGATCCTAAATGGCATGGTACACGGAGTGAACTTCCATTTCTTAACTCTCTAAAAATGAAGATGTCAATTCTACTTGGAGTATCCCAAATGAATCTTGGAATCATTCTGAGTTACTATAATGCCAAATACTTTGAAAACAACATAAACATATGGCACCAATTTGTTCCCCAAATTATATTCCTGAACAGCCTATTTGGCTATCTTTCACTCCTCATAATTGTAAAATGGTGCACTGGATCACAGGCTGATTTGTATCATGTAATGATATACATGTTTCTAAGTCCAACAGATGATTTGGGTGAAAACCAGCTCTTTGTTGGCCAAAAGTTATTACAAGTTATATTACTATTGTTGGCACTCGTTTCAGTACCATGGATGTTATTACCAAAGCCCTTTCTCTTGAAGAAACAACATCAAGAAAGGCATAAAAGTCAATCCTACTCTTTGATCTACAACGTGGATGATCCTCTTGAATCAAAGTCACATGGTATTCACAAAAACCACCAGGAGTTTGATTTCAGCGAGGTTTTTGTGCACCAACTTATACATACAATAGAATTTGTGCTTGGAGCTGTGTCTAATACAGCTTCATATCTTCGTTTATGGGCCCTCAGTTTAGCTCATTCAGAGTTGTCAAGCGTTTTCTACGACAAAGTTTTGCTTCTCACATGGGGGTATAACAACATCATTGTTCTCATTGTTGGCATTATTGTTTTTATATGTGCAACCGTTGGTGTCTTACTAGTAATGGAAAGTTTAAGTGCGTTCTTGCATGCTTTGAGACTTCATTGGGTAGAGTTTCAGAACAAGTTTTATGAGGGAGATGGATACAAGTTCAACCCATTTTCATTTACATCCCTTAATGACGAGGATGGACTGTAG 2433 0.3724 MDLLRSEPMQLVQLIIPIESAQRSISYLGDLGLFQFKDLNEDKSPFQQTYASQVKRCGEMSRKLRLFKEQMKKANISPSTWSTRDGSIDLEKLEVKLAELEAELIEINSNNEKLQHTYNELIEYKLVLEKVGEFFSSAQISAATRQRELEVQQPSVEGSIDCPLLMEQETTAYPVKQIKLGFITGLVTREKSIPFERILFRATRGNVFLKQAVVEHHVLDPLSGEKVHKNVFIIFYSGERVKSKINKICDAFGANRYPFSDDLSKQFEMMTEVSERVVELKTTIDVGLLHRSNLLQTIGYKFEQWNLLLQKEKSIYHILNMLNINVTKKCLLAEGWCPVFATSQIQKTLMRATMDCNSQVEAIVQVLQTNELPPTYFCTNIFTSSFQEIIDAYGIAKYQEANPGVYTIITFPFLFAVMFGDWGHGICLLLATLYFIINEKKFYCQKLGDILEMVFGGRYIIMMMALFSIYTGLIYNEFFSIPFELFGQSAYGCRDPTCRDATTIGLVKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIILSYYNAKYFENNINIWHQFVPQIIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKLLQVILLLLALVSVPWMLLPKPFLLKKQHQERHKSQSYSLIYNVDDPLESKSHGIHKNHQEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLTWGYNNIIVLIVGIIVFICATVGVLLVMESLSAFLHALRLHWVEFQNKFYEGDGYKFNPFSFTSLNDEDGL* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4231 810 PIRSF ATP6V0A1 1 809 IPR026028 GO:0000220|GO:0046961
Mtr3g4231 810 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1 810 - -
Mtr3g4231 810 PANTHER VACUOLAR PROTON ATPASES 1 810 IPR002490 GO:0033179|GO:0046961|GO:1902600
Mtr3g4231 810 Coils Coil 83 117 - -
Mtr3g4231 810 Pfam V-type ATPase 116kDa subunit family 27 801 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4231 Mtr-Chr3 56177546 56183332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4231 1 808 Primary Pumps ATPases(2) AT2G21410 71.658 0.0 1220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4231 K02154 - gmx:100805813 1335.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4231 3 56177546 56183332 Mtr3g4231 3 56177546 56183332 ECH