Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4208 ATGTCAAAATCAATGGAACTCCCTGATTGTATCTATCCATGCCAACCAATCACTAGTATTCCACCAAGTATTCCAACGCCAAAACATTCTCTCTATCTTTCTAATCTTGATGACCAAAAGTTCCTTAGATTTTCTATCAAGTATTTGTACATTTTCAAGAAGTCTGTGAATTTGGATCATTTGAAGTGTTCTCTATCTAGAGTTTTAGTGGATTATTACCCATTAGCTGGGAGGTTGAGAAGTTGTTCCTCTAATTTGGATGATGAGAAGAAGCTTGAAGTGGATTGCAATGGAGAAGGTGCTTTGTTTGTTGAGGCTTTCATGTCTATCACTGCTCAAGAATTACTTGAACCTTCTAAGTTGCCAAACAAGTCATGGAGAAAGTTCACTTATAAGGTGGAATCTCAAAGTTTCTTAGATGTTCCTCCTCTTATAGTTCAGTTAACAAATCTCCGTTGCGGAGGAATGATTCTATGCACCGCAATCAACCACTGTCTATGCGATGGTATCGGCACATCTCAATTTCTACACGCATGGGCACAACTAACCAAAAATCCTCAAACCAATTTGACCATCCCACCTTTCCATTGGCGACATGTGTTGAAACCACGATACCCTCCCACCGTAAACCTCCTCAATCCCGGATACACTAGAACACAACCAACACCTCAAGTAAACCTTCTCAAGTTAATACAATCACAACCATTAGTACCCACATCATTTATCTTTAATCCCTCCCATGTCCTCTACTTAAAGAAACAATGTGTCCCTTCACTTAAGTGTACTACCTTTGAAGTAGTGGCAGCACACACATGGCGCTCTTGGATTCGTTCAATGAATCTATCATTACCCTCCACTCTAATTGTTAAGCTACTTTTCTCTATTAACATTCGTACCATAATGAACCTACCAAAAGGATATTACGGAAATGGATTTCTATTAGGATGTGCTGAAAGTACTATAAAGGACTTGGTAGAGAATAATTTGCATCATGGTGTGAAGTTAGTGCAAAAGGCTAAGTCAAAGGTTAATGATGAGGAATATATTAGATCAACGGTTGATTTGTTGGAGGATAAAACAGTAAAAACGGATGTTTCAATTAGCTTGGTTATATCACAATGGTCTAAACTAGGGTTAGAAGAAGTGGATTTTGGAGAGGGAAAAGCGTTACATATGGGTCCTTTAACAAGTGATGTTTATTGCTTATTTTTACCTGTTATTGGTGGTGATGCTAATGCTGTGAGAGTGGTTGTTTCTGTGCCGGAGAGTATGGTTGAAAATTTTCAATATTATATGAAGGAAAGCTGGGAAAAGAAAATAGAAAAAAATGGAGATCATGTTAAAAATGGCTATCATGTGCATGAGAATCCATTTTTCTAA 1380 0.3775 MSKSMELPDCIYPCQPITSIPPSIPTPKHSLYLSNLDDQKFLRFSIKYLYIFKKSVNLDHLKCSLSRVLVDYYPLAGRLRSCSSNLDDEKKLEVDCNGEGALFVEAFMSITAQELLEPSKLPNKSWRKFTYKVESQSFLDVPPLIVQLTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAQLTKNPQTNLTIPPFHWRHVLKPRYPPTVNLLNPGYTRTQPTPQVNLLKLIQSQPLVPTSFIFNPSHVLYLKKQCVPSLKCTTFEVVAAHTWRSWIRSMNLSLPSTLIVKLLFSINIRTIMNLPKGYYGNGFLLGCAESTIKDLVENNLHHGVKLVQKAKSKVNDEEYIRSTVDLLEDKTVKTDVSISLVISQWSKLGLEEVDFGEGKALHMGPLTSDVYCLFLPVIGGDANAVRVVVSVPESMVENFQYYMKESWEKKIEKNGDHVKNGYHVHENPFF* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4208 459 PANTHER BNAC03G58010D PROTEIN 13 441 - -
Mtr3g4208 459 Pfam Transferase family 19 432 - -
Mtr3g4208 459 Gene3D - 15 218 IPR023213 -
Mtr3g4208 459 Gene3D - 229 433 IPR023213 -
Mtr3g4208 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4208 Mtr-Chr3 55948940 55951977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4208 18 394 Monolignol Biosynthesis Gene Families AT5G48930 28.358 6.29e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4208 - - gmx:100810619 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4208 3 55948940 55951977 Mtr3g4208 3 55948940 55951977 ECH