Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4190 ATGGGTTGGACAAGAGAAGAGAACAGACGTTTTGAGGATGCACTTGCAGTATATGGTCCAGAAGATCCAAATCGGTGGCAACATGTAGCTAATGCTGTTGGTGGAAAATCCATACAAGAGGTGAAAATGCATTACGAGATCCTCAAGGAAGATCTCATACGAATTGAGCATGATCAAATCCCACTGCCAACATACAGGGGAGGTGCTGGTATCAATATCACCAATGGAAGGCAATTTGGCAATGAGCAAAGGCGAATGAGGAATCTTAATATCCATTGA 279 0.4301 MGWTREENRRFEDALAVYGPEDPNRWQHVANAVGGKSIQEVKMHYEILKEDLIRIEHDQIPLPTYRGGAGINITNGRQFGNEQRRMRNLNIH* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4190 92 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Mtr3g4190 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 66 IPR044636 GO:0003700
Mtr3g4190 92 SMART sant 3 51 IPR001005 -
Mtr3g4190 92 CDD SANT 3 49 IPR001005 -
Mtr3g4190 92 Gene3D - 2 50 - -
Mtr3g4190 92 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Mtr3g4190 92 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Mtr3g4190 92 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Mtr3g4190 92 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Mtr3g4190 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4190 Mtr-Chr3 55791610 55793671 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr3g4190 Myb_DNA-binding 3.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4190 - - gmx:100789698 153.295