Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4178 ATGTCTAAACGCTTTAAGATGAAATTTACAATCCCTTCTTTTCAAATGTGTCGCTCCAATGACCTTTCCTCTTTCCCCGGGAATCCAGGCCCTGCCATATACCGTCTTTCTCCTGTCAACTCCAAAGCACATGACATAGGGTATCCAAACCTTCCTGCTTTGTCGCCGGAACACCAATGCAGTGTGTCATCAAAGGTCAAGAAAGTGAAATCCAAAGGCCGGAAAAGTACATCCGACGTTCCTTCAAGAAGAAGTGAGTTTCTAATTGATAAAATCAATGAAGAGGAAAGTGAATCGTTGATTTCTTGCTTAGCAAGATTCTCGGAAGACGAGAAGGTCCATTCGTCTAGTACTATGGACAGTAAAGTTAAGGCTATCTCAAATTTTAGTGATAAAAAGGAGAATAAAGATTTAACTAGCGCAAATAGAAGGACGCTAAGTCGTGTAAAGAAGGTTGAGAGAGTGAGGTTTCAAAGTATTACAGAGAATCAAAGAGGAAAAGAAACGAAGGTTATGTCAAGTAGAATGGAAGAGAATCGAAGAGGAACCGAAACGAAGGTTATGTCAAGTAGAATGGAGGAGAAGGTAAAAGAAAGCTTTGCTTTGGTGAAAAAGTCAAAGGATCCTTACGAAGACTTCAAGAAATCAATGTTAGAGATGATAGAAGAGATGGAAATGTCTGAAGCCAAGGACTTGGAGCAACTATTGCAGTGTTTTTTGGCTCTGAATTCTAGAGATTATCATGGAGTAATTGTGCGAGCTTTCATGGAGATTTGGCAACAAATGTTCGTTTGGAATCCTAAGTCGATTACAAATCTTCAAACAAGTGTTCAAACTAAGGATGTGGAATTGTAG 855 0.3942 MSKRFKMKFTIPSFQMCRSNDLSSFPGNPGPAIYRLSPVNSKAHDIGYPNLPALSPEHQCSVSSKVKKVKSKGRKSTSDVPSRRSEFLIDKINEEESESLISCLARFSEDEKVHSSSTMDSKVKAISNFSDKKENKDLTSANRRTLSRVKKVERVRFQSITENQRGKETKVMSSRMEENRRGTETKVMSSRMEEKVKESFALVKKSKDPYEDFKKSMLEMIEEMEMSEAKDLEQLLQCFLALNSRDYHGVIVRAFMEIWQQMFVWNPKSITNLQTSVQTKDVEL* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4178 284 ProSiteProfiles OVATE domain profile. 202 261 IPR006458 -
Mtr3g4178 284 MobiDBLite consensus disorder prediction 164 190 - -
Mtr3g4178 284 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 49 IPR038933 GO:0045892
Mtr3g4178 284 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 63 271 IPR038933 GO:0045892
Mtr3g4178 284 Pfam Transcriptional repressor, ovate 206 263 IPR006458 -
Mtr3g4178 284 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 201 262 IPR006458 -
Mtr3g4178 284 PANTHER TRANSCRIPTION REPRESSOR OFP7 63 271 - -
Mtr3g4178 284 PANTHER TRANSCRIPTION REPRESSOR OFP7 1 49 - -
Mtr3g4178 284 MobiDBLite consensus disorder prediction 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4178 Mtr-Chr3 55698068 55699094 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mtr3g4178 Ovate 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4178 - - gmx:102662518 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4178 3 55698068 55699094 Mtr3g4178 3 55698068 55699094 ECH