Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4161 ATGATCATAGAACACCCACTTCTATTCCTTTTATTACTATCATTAATCTTTCTCCCTATAATCACATGTCAAGTTAATTACCGTGAGTGCCACCAATCATGTGGTTCACACAAACCCTTCCCTTACCCATTCGGATTCTCTTCCGGTTGCGAAATCCGCCTCAACTGCACCGTCGACGGCGAAATCTTCATCGGAGAATTTCCAGTCCAATCGGTAAACTCAAACAGTATAATAGTAAACATCGAATCACAATGTAATCGTTCATTTGATACGTTTCACCAACTCTTCAGTCACAAACACGCACCTACTTCGGGAAACGTGATTCTGTTACAGAACTGTACGGAAAATCTCTTGCCTTGTTCTATACCGGAGACTCTGCTTCCTAGTCAATTCGAATCTGAATCTGACGGTTGCGGCGGCGCCGGTAGCGGGAAATTGAGTTGTTACTTTGAAAATACTACGAGTCGTTTCGTGAATGAGACAAAATTGGAACGAATTGGATGCAAATACTTTATGTCATCGATATCAATTGAAGACTTGAGAAAGAGTTCGGATTCGGCGATTTCTTTGGAAGTAGCTACGATTGAGCTTGGATGGTGGATTCATGGAGATCAGTGTCTTTGTTCTGATCATGCTAATTGTACTAAAATTGTATCACCGATTGATCGAAAGCCTGGGTTTCGGTGTCAGTGTGATGAAGAGTTCGTCGGCGATGGTTTTTTGGCTGGAACTGGCTGCCGGAAAAAAGCCTCATCAACATGCAACCCAGCAAAGTACATGTCCGGAAGATGTGGAGGAACAACGAGATTCATCGTCTTAATTGGAGGTTTTGTTTTTGGCGTTTCACTCATGATTACTCTGGCTTCAGTATGTTGTTACTTTCGCCGTCGCACCAAATTGAGAGTCACAAAGAGCACAAAAAGACGCTTCACAGAAACTACTAACAATTACAGTGTTCCTATCTATCCCTACAAAGACATCGAAAAAGCCACAAATAGTTTTTCAGAGAAACAAAGGTTGGGAACAGGAGCATATGGTACAGTTTATTCTGGAAAACTTTACAATGATGAATATGTTGCCATCAAAAGAATAAAACACAGAGATAATGAGAGCATTGAACAAGTCATGAATGAGATCAAGCTCATTTCCTCTGTTAGTCACCCCAATTTAGTGCGTTTGTTGGGTTGTTCCATCGAATATGGAGAACAAATTTTAGTGTATGAGTTCATGTCAAACGGAACACTGAATCAACATTTGCAAAGAGAGACAGGAAATGGACTTTCATGGCCTGTTAGACTCAAAATTGCGACAGAAACAGCACAAGCCATATCACATCTTCATTCAGCAATTGATCCACCTATATACCATAGAGATATAAAATCAAGTAACATACTTTTGGACCAAAATTTTGGATCCAAAGTAGCAGATTTTGGGCTTTCTAGACTTGGAATAACTGAAATATCTCACGCTTCCCACGTTTCAACTGCTCCTCAAGGAACACCGGGCTACGTTGACCCACAATACCATCAAGACTATCACCTTTCTGATAAAAGCGATGTATATAGCTTTGGTGTGGTTCTTGTTGAGATCATAACAGGACTAAAAGTAGTGGACTTTTCTCGTCCTCATAATGAAGTGAATTTGGCTTCTCTTGCTGTTGACAGGATCAGAAAAGGGCTTTTAGATGATATTATAGACCCAATCATATTTCTTCATTCCCAAGCAACCAGTGAAGGGTGGACACTTTCTTCCATACACAAGGTAGCTGAGTTGGCATTCAGATGTCTTGCATTTCACAGGGATATGAGACCTTGTATGACTGAAGTGGCAACTGAGTTAGAGCAACTAAGGTTGAATAAATGGAACTCTTTTGAAGAAAATAACTCTATTATAGCTTCAATAGATCACTTGTCTTCTTGCTCTTCCTCCTCTTCTAGCGAAAGTGAGAAACCTTTGAGGAGCACCACCACACTGAAGGATGTTGGGCCTAAGGGTAAATCCCATCTTAAGCTTGAGACTGGGCCCATTTCTTTTAAGTCAGTTGAAAGGCCCAACAGTAGCTCACCAGTTTCGGTGCAAGACCCAGACCCATGGTTTAGTGAGCAGAGCTCTCCTTCAAATAGTTTCCCCAGTAAGTCATTTGATCGTGGATCTGTTTCATATGGTCAACAATCTAGTTTGTAG 2184 0.4103 MIIEHPLLFLLLLSLIFLPIITCQVNYRECHQSCGSHKPFPYPFGFSSGCEIRLNCTVDGEIFIGEFPVQSVNSNSIIVNIESQCNRSFDTFHQLFSHKHAPTSGNVILLQNCTENLLPCSIPETLLPSQFESESDGCGGAGSGKLSCYFENTTSRFVNETKLERIGCKYFMSSISIEDLRKSSDSAISLEVATIELGWWIHGDQCLCSDHANCTKIVSPIDRKPGFRCQCDEEFVGDGFLAGTGCRKKASSTCNPAKYMSGRCGGTTRFIVLIGGFVFGVSLMITLASVCCYFRRRTKLRVTKSTKRRFTETTNNYSVPIYPYKDIEKATNSFSEKQRLGTGAYGTVYSGKLYNDEYVAIKRIKHRDNESIEQVMNEIKLISSVSHPNLVRLLGCSIEYGEQILVYEFMSNGTLNQHLQRETGNGLSWPVRLKIATETAQAISHLHSAIDPPIYHRDIKSSNILLDQNFGSKVADFGLSRLGITEISHASHVSTAPQGTPGYVDPQYHQDYHLSDKSDVYSFGVVLVEIITGLKVVDFSRPHNEVNLASLAVDRIRKGLLDDIIDPIIFLHSQATSEGWTLSSIHKVAELAFRCLAFHRDMRPCMTEVATELEQLRLNKWNSFEENNSIIASIDHLSSCSSSSSSESEKPLRSTTTLKDVGPKGKSHLKLETGPISFKSVERPNSSSPVSVQDPDPWFSEQSSPSNSFPSKSFDRGSVSYGQQSSL* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4161 727 Gene3D Phosphorylase Kinase; domain 1 294 409 - -
Mtr3g4161 727 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 22 653 - -
Mtr3g4161 727 SMART serkin_6 334 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4161 727 ProSiteProfiles Protein kinase domain profile. 334 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4161 727 Pfam Protein kinase domain 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4161 727 Gene3D Laminin 207 241 - -
Mtr3g4161 727 MobiDBLite consensus disorder prediction 679 727 - -
Mtr3g4161 727 SUPERFAMILY Protein kinase-like (PK-like) 309 614 IPR011009 -
Mtr3g4161 727 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 653 IPR045274 GO:0007166
Mtr3g4161 727 MobiDBLite consensus disorder prediction 642 727 - -
Mtr3g4161 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Mtr3g4161 727 Gene3D Transferase(Phosphotransferase) domain 1 410 638 - -
Mtr3g4161 727 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4161 Mtr-Chr3 55508246 55518303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4161 1 708 Receptor kinase-like Gene Family AT2G23450 49.167 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Mtr3g4161 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4161 - - mtr:MTR_3g111510 1437.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4161 3 55508246 55518303 Mtr3g4161 3 55508246 55518303 ECH