Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4142 ATGGCGAATCCCGAAACTCACCGTCAACACCACCGGTCTAAACCTCGACCCTCTCCATCTTCAACGGTTCGAATCAAACCACGTCCCAAAGACCGGGTCCTACTCACAAAGCTTCTCCGAGTAGCATCCGTCGCCGGCGGGATTCAATTCGGATGGGCTTTGCAACTCTCTCTTCTAACACCATATGTGCAACAGCTCGGAATCCCACACGCGTGGGCCAGCATTATATGGTTATGTGGGCCTCTTTCTGGGCTTCTTGTTCAACCCTTGGTTGGGCATTTGAGTGATCGGTGTACGAGTCGATTTGGGAGAAGAAGACCGTTTATACTCGGAGGAGCTGTTTCGATTGTGATTTCTGTTCTTATTATTGGTCATGCTGCGGATTTGGGATGGAAATTTGGTGATACCAAGAATCATCGCCATTCTGCTGTCGCGTTTTTTGTTTTCGGGTTTTGGATTTTGGATGTTGCTAATAATGTTACTCAAGGTCCTTGTAGAGCATTGCTTGGTGATCTCACTGGTAAGGATCATCGAAGGACACGTGTCGCAAATGCTTATTTCTCCCTATTTATGGCTATTGGTAACATTCTTGGATATGCAACTGGATCATACAGTGGTTGGTACAAGGTCTTTCCTTTCACACTTACCCCTGCATGCAATATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTGGACATTGGTTTCATTATCATCACCACCTATATCAGTATCATGGCAGCTAATGAAGTGCCTCTTGGGACACCCAATGCTGAAGCAGAAGGGGAGTCAGGTGGTAGTGCGGAAGAAGCTTTCCTTTGGGAGCTATTTGGGACATTCAGATATTTTTCAAAGCCTATATGGGTAATATTGTCTGTTACTGCTCTAACATGGGTTGGGTGGTTCCCATTTCTTCTATTCGATACCGATTGGATGGGCCGAGAAATTTATGGCGGTGAGCCAAATGAAGGCACTAATTATGATACTGGAGTTAGAATGGGGGCACTTGGTTTATTGCTTAATTCAGTTGTTCTTGGAATAACATCAGTACTCATGGAGAAGCTATGCAGGAAGCGGGGGCCTGGGTTCGTGTGGGGAATCGCAAATATCCTAATGGCTGTCTGCTTCGTAGCAATGCTTGTAGTAACCTATGTGGCAAATACCATTGGTTATATAGGCAAAGATCTACCGCCCACTAGCATCGTGATATCTGCACTGGCAATCTTTACCATTCTCGGGTTTCCACTGGCTATCACTTACAGTGTTCCATATGCCTTAATTTCCACGCATATTCAGTCATTGGGGCTTGGCCAAGGATTGTCAATGGGAGTCCTAAATCTTGCAATAGTGTTCCCACAGATGATAGTGTCCTTAGGAAGTGGACCTTGGGATCAGTTATTTGGTGGAGGAAACTCTCCAGCCTTTGCTGTGGCAGCTGTTGCAGCCCTTGCCAGTGGACTCATAGCTGTCTTGGCTATTCCCCGAACTGGTACTCAAAAGTCTCGAAGTCCAGTATGA 1518 0.4592 MANPETHRQHHRSKPRPSPSSTVRIKPRPKDRVLLTKLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLLVQPLVGHLSDRCTSRFGRRRPFILGGAVSIVISVLIIGHAADLGWKFGDTKNHRHSAVAFFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNILGYATGSYSGWYKVFPFTLTPACNISCANLKSAFFLDIGFIIITTYISIMAANEVPLGTPNAEAEGESGGSAEEAFLWELFGTFRYFSKPIWVILSVTALTWVGWFPFLLFDTDWMGREIYGGEPNEGTNYDTGVRMGALGLLLNSVVLGITSVLMEKLCRKRGPGFVWGIANILMAVCFVAMLVVTYVANTIGYIGKDLPPTSIVISALAIFTILGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVFPQMIVSLGSGPWDQLFGGGNSPAFAVAAVAALASGLIAVLAIPRTGTQKSRSPV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4142 505 Gene3D MFS general substrate transporter like domains 36 253 IPR036259 -
Mtr3g4142 505 Gene3D MFS general substrate transporter like domains 283 501 IPR036259 -
Mtr3g4142 505 PANTHER SUGAR TRANSPORTER 11 503 - -
Mtr3g4142 505 TIGRFAM GPH_sucrose: sucrose/H+ symporter 35 496 IPR005989 GO:0005887|GO:0008515|GO:0015770
Mtr3g4142 505 MobiDBLite consensus disorder prediction 1 26 - -
Mtr3g4142 505 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 11 503 - -
Mtr3g4142 505 Pfam MFS/sugar transport protein 53 431 - -
Mtr3g4142 505 CDD MFS_SLC45_SUC 38 472 - -
Mtr3g4142 505 SUPERFAMILY MFS general substrate transporter 33 497 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4142 Mtr-Chr3 55270575 55277649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4142 1 500 Sucrose Transporter Gene Family AT1G09960 69.565 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4142 K15378 - gmx:100787939 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4142 3 55270575 55277649 Mtr3g4142 3 55270575 55277649 ECH