Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4140 ATGTTTTCCTCGCGAGTTTTCTCTCTTCTCCTTCTTTTCTCACTACTCACAATTGCCAAATCAAACGAGCATGAAATTCTACTGAACCTTAAAACCTCCCTCGAAAATCCAAACACCAAAGATTTCTTCAACTCATGGAATGCAAACAGTTCCATTTGCAGTTTCCATGGAATCACCTGCAACTCCATCAACTCCGTCACAGAAATCAACCTTTCTCATAAAAACCTCTCAGGAATTCTCCCAATAGACTCACTCTGCAACCTTCAATCCCTCACAAAACTCGTCTTAGGTTTCAACTATTTCCATGGCAGAGTTAATGAAAGCCTTAGAAACTGTGTCAAGTTACAGTTCTTGGATTTAGGAAAAAATTATTTCTCAGGACCTTTTCCAGATATTTCACCTCTTCATGAACTTGAATACCTTTACGTAAACAAAAGTGGATTTTCTGGAACTTTTCCATGGCAATCTCTGTTGAATATGACAGGTTTGTTACAGTTAAGCGTCGGAGACAACCCTTTCGATCTAACGCCGTTTCCTGAAGAGATTTTAAGTCTCAAGAAGCTGAATTGGCTTTACATGAGTAACTGCAACCTTGGAGGGAAATTACCAGTTGGAATCGGTAACTTAACGGAGTTAACAGAATTAGAATTCGCCGATAATTCCATTACCGGAGAATTTCCCGGTGAGATTGTCAACCTTCACAAGCTCTGGCAGCTTGAATTCTACAACAATTCCTTCACCGGGAAGATTCCGATTGGGTTGAGAAATCTCACAGGACTCGAGTATTTGGACGGATCAATGAATCAATTAGAAGGAAATCTCTCTGAGATAAGGTTTTTAAGTAATCTAATTTCACTTCAATTCTTCGAAAACAAATTATCCGGCGAGATTCCACCGGAGATAGGTGAGTTTAAAAACCTCCGGGAACTGTCTCTTTACAGAAACAGATTAACAGGTCCAATTCCTCAGAAGACTGGATCATGGTCAGAATTTGAATACATCGACGTTTCGGAGAATTTCTTAACGGGTTCAATTCCACCAAACATGTGCAACAAAGGAAAAATGTACGCACTTCTTCTTCTTCAGAACAATCTCACAGGTAAGATACCGGAAAGCTACAGCACCTGTTTGAGTTTAGAACGCCTCAGAGTGAGTAGAAACTCGCTCTCAGGTACCGTTCCTTCCGGTATTTGGGGATTACCCAATGTTCAAGTAATTGATGTTGAATTGAATCAGTTAGAAGGTTCCGTTAGTTCAGAGATTCAAAAAGCGAATAAACTTGCTAGTATATTCGCAAGGAGTAACCGGTTAACGGGTGAAATACCGGAAGAGATTTCTAAAGCAACGTCGTTGGTATCAATTGATCTTAGTAACAATCAAATTTCTGGGAACATTCCAGAAGGTATTGGTCAACTTCAACAACTTGGTAACCTGCATTTGCAGGGTAACAAGTTAACAGGGGTAATTCCGGAGTCTTTAGGTTATTGTAACTCACTCAACGACGTTGATCTTTCGAGAAATGAACTCTCGAAAGATATTCCTTCGTCCTTGGGTTTGTTACCGGCTTTAAATTCTCTGAATTTCTCAGAGAATGAACTTTCCGGTAAAATACCAGAGAGTTTAGGTTCATTGAAGTTGAGTCTCTTTGATCTTTCGCATAACCGATTATCCGGTGAAATTCCAATAGGTTTGACTATTCAAGCTTACAATGGAAGCCTCACCGGAAACCCGGGTTTATGCACGCTTGATGCTATTGGTTCCTTCAAGCGTTGTTCTGAGAATAGTGGCTTGTCAAAAGATGTCCGTGCCCTTGTTCTTTGTTTCACTATAATTTTGGTTTTGGTCCTTTCTTTTATGGGTGTTTACTTGAAGTTGAAGAAAAAGGGGAAGGTAGAAAACGGAGAGGGTAGTAAATATGGAAGAGAACGTTCTTTAAAGGAAGAATCATGGGATGTGAAATCTTTCCACGTGCTAAGTTTCACAGAAGATGAGATTCTTGATTCTGTTAAGCAAGAGAATATAATAGGAACAGGAGGTTCAGGGAATGTTTATAGAGTCACCCTTGCAAATGGAAAAGAACTTGCTGTTAAGCATATTTGGAACACCAATTTTGGGTCCCGGAAAAAGTCATGGAGCAGCACACCGATGCTCGCAAAGCGCGTTGGTAGTGGTGGTTCAAGGTCGAAGGAATTCGATGCGGAGGTTCATGCGTTGAGTTCAATAAGACATGTGAATGTGGTGAAGCTTTATTGTAGTATAACGAGTGAGGATTCAAGTCTTTTGGTTTATGAGTATTTGCCTAATGGAAGTTTGTGGGATAGGCTTCATAGTAGTGGCAAGATGGAGCTTGATTGGGAAACAAGGTATGAAATTGCTGTTGGTGCTGCAAAAGGGTTGGAGTATTTGCATCATGGGTGTGAAAGGCCTGTGATTCATAGGGATGTTAAATCTAGTAACATTTTGTTAGATGAGTTTCTGAAACCTAGGATTGCTGATTTTGGTCTTGCTAAGATTGTTCATGCCGATGTTGTTAAGGATTCTACTCATATCATTGCCGGAACTCATGGCTACATCGCTCCCGAATATGGTTACACATATAGAGTGAATGAGAAAAGTGATGTGTATAGTTTCGGAGTGGTGTTGATGGAGCTTGTAACTGGTAAAAGGCCAAGTGAACCTGAATTCGGAGAAAACAAAGACATAGTAAGTTGGGTTCATGGGAAGACAAGGAGCAAGGAGAAGTTTATGAGTGTGGTGGATTCGAGAATTCCGGAGATGTATAAAGAGGAAGCTTGTAAGGTATTGAGAACTGCAGTTCTTTGTACAGCAACTATTCCTGCTATGAGACCAAGTATGAGAGCTGTGGTTCAAAAACTTGAGGATGCTGTACCTTGTAAATTGGTTGGAATAGTTATTAGCAAAGATGGGAGTGGAAAGAAAATTGAGGTCAATGATAAATGA 2961 0.4019 MFSSRVFSLLLLFSLLTIAKSNEHEILLNLKTSLENPNTKDFFNSWNANSSICSFHGITCNSINSVTEINLSHKNLSGILPIDSLCNLQSLTKLVLGFNYFHGRVNESLRNCVKLQFLDLGKNYFSGPFPDISPLHELEYLYVNKSGFSGTFPWQSLLNMTGLLQLSVGDNPFDLTPFPEEILSLKKLNWLYMSNCNLGGKLPVGIGNLTELTELEFADNSITGEFPGEIVNLHKLWQLEFYNNSFTGKIPIGLRNLTGLEYLDGSMNQLEGNLSEIRFLSNLISLQFFENKLSGEIPPEIGEFKNLRELSLYRNRLTGPIPQKTGSWSEFEYIDVSENFLTGSIPPNMCNKGKMYALLLLQNNLTGKIPESYSTCLSLERLRVSRNSLSGTVPSGIWGLPNVQVIDVELNQLEGSVSSEIQKANKLASIFARSNRLTGEIPEEISKATSLVSIDLSNNQISGNIPEGIGQLQQLGNLHLQGNKLTGVIPESLGYCNSLNDVDLSRNELSKDIPSSLGLLPALNSLNFSENELSGKIPESLGSLKLSLFDLSHNRLSGEIPIGLTIQAYNGSLTGNPGLCTLDAIGSFKRCSENSGLSKDVRALVLCFTIILVLVLSFMGVYLKLKKKGKVENGEGSKYGRERSLKEESWDVKSFHVLSFTEDEILDSVKQENIIGTGGSGNVYRVTLANGKELAVKHIWNTNFGSRKKSWSSTPMLAKRVGSGGSRSKEFDAEVHALSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHSSGKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVHADVVKDSTHIIAGTHGYIAPEYGYTYRVNEKSDVYSFGVVLMELVTGKRPSEPEFGENKDIVSWVHGKTRSKEKFMSVVDSRIPEMYKEEACKVLRTAVLCTATIPAMRPSMRAVVQKLEDAVPCKLVGIVISKDGSGKKIEVNDK* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4140 986 SMART serkin_6 669 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4140 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Mtr3g4140 986 Gene3D Transferase(Phosphotransferase) domain 1 766 966 - -
Mtr3g4140 986 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Mtr3g4140 986 SUPERFAMILY L domain-like 24 322 - -
Mtr3g4140 986 Pfam Protein kinase domain 670 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4140 986 PANTHER RECEPTOR-LIKE PROTEIN KINASE 7 9 971 - -
Mtr3g4140 986 SUPERFAMILY Protein kinase-like (PK-like) 661 959 IPR011009 -
Mtr3g4140 986 Gene3D Ribonuclease Inhibitor 178 279 IPR032675 -
Mtr3g4140 986 Gene3D Ribonuclease Inhibitor 20 177 IPR032675 -
Mtr3g4140 986 Gene3D Phosphorylase Kinase; domain 1 652 765 - -
Mtr3g4140 986 SUPERFAMILY L domain-like 269 589 - -
Mtr3g4140 986 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 971 - -
Mtr3g4140 986 ProSiteProfiles Protein kinase domain profile. 669 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4140 986 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Mtr3g4140 986 Gene3D Ribonuclease Inhibitor 280 586 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4140 Mtr-Chr3 55227938 55231624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4140 7 984 Receptor kinase-like Gene Family AT1G09970 58.087 0.0 1124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr3g4140 Pkinase 2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4140 - - gmx:100779554 1502.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4140 3 55227938 55231624 Mtr3g4140 3 55227938 55231624 ECH