Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4139 ATGAACCATCATCAACCATTCTTCTTCTTTGGACTAATAGTTATTATTTCCATGACCAACATGTCACATGTTATCAGCACAAACCAATCTGAGTTTTTTTCTCTAATGAAAGAGTCTCTCTCAGGAAACTACCCTTTTGATTGGGGTGTAAGCAAAGTGGATAAACCAATCTGCGACTTCACCGGAATCACCTGTGACAACAAAGGAGACATCATAAGTCTTGATTTTTCAGGTTGGTCATCACTTTCCGGAAACTTCCCGTCAAATATTTGCTCTTACCTTCCAAATTTACGTGTCCTAAACCTCGGTAATACAAAATTCAAGTTCCCAACAAACAGCATAATCAACTGTTCTCACTTAGAACTACTCAACATGAACAAGATGCACCTGTCAGGAACACTTCCTGATTTCTCGTCTTTAAAATATCTCAGAGTCCTCGACTTATCATACAACTCCTTCACCGGCGATTTTCCCATGTCTGTTTTCAACCTCACCAATCTTGAAATTCTCAACTTCAACGAAAACAGTAAACTCAATCTTTGGGAATTACCAAAAAGCTTTGTAAGATTGAGAAGTCTTAAATCCATGATTTTATCAACATGCATGTTGCATGGTCAAATTCCACCATCCATATCAAATATAACAACACTCATTGATCTTGAATTAAGTGGAAATTTCCTCACAGGTCAAATTCCAAAAGAACTTGGATTGTTGAAAAACTTGCAACAGCTTGAACTTTACTATAACTACTTCCTTGTTGGCAGCATCCCTGAAGAGCTTGGAAATTTAACAGAACTTGTCGATTTAGATATGTCGGTAAACAAGTTAACTGGAACAATCCCTTCTTCTGTTTGTAAACTTCCAAAGCTTCAGGTTCTCCAATTCTACAATAACAGTCTCACAGGTGAAATTCCAAAATCAATTGAAAACTCAAAAACACTTAGAATATTGTCACTTTACGACAATTTCTTAAGTGGACACGTTCCTGCGAAACTAGGACAATCCTCCGGAATGGTTGTTCTTGATTTGTCCGAAAACAAGTTGTCTGGCCCTTTGCCAGAACATGTCTGTCAAGGAGGTAAACTGTTATATTTTCTTGTTTTGGATAACTTTTTCTCTGGTGTTATACCAGAAAGTTATTCAAATTGCATGTTTCTGTTAAGGTTTCGTGTCAGTAATAACCGTTTGGAAGGTTCTGTTCCAAAAGGACTCTTGAGTTTATCACATGTTTCAATCATTGATTTGAGCAGCAACAATCTGACCGGTCCGATTCCCGAGATCAACGGAAATTCTAGAAACTTGTCTGAGCTTTTCCTTCAGAGGAACAAGATTTCAGGACAAATAACACCAACAATCTCTAGTGCTTATAACCTTGTCAAAATTGATTTCAGTTATAACTTTCTTTCTGGTCCAATTCCTTCTGAGATTGGTAACCTTAGAAAGCTTAACTTGCTTATGCTACAAGCAAACAAGCTGAACTCTTCTATTCCTGATTCATTCTCTTCCTTGGAATCACTCAACCTTCTAGATCTTTCCAGTAATCTCTTAACCGGAAACATCCCTGAAAGCCTCTCTGTGTTGTTGCCTAATTCTATAAACTTTTCACACAATCTTCTTTCTGGTCCTATTCCTCCTAAATTGATTAAAGGAGGGTTAGTTGAAAGCTTTGCAGGGAATCCTGGTTTATGTGTGATGATGCCGGTTAATGCTAATTCATCTGATCAAAGAAACTTTCCATTATGTTCACATGGTTACAAGAGTAAGAAGATGAACACTATATGGGTGGCCGGTGTATCTGTGATTTTGATTTTTGTAGGTGCTGCTTTGTTCTTGAAAAAAAGGTGTGGCAAAAATGTGTCTGCGGTTGAACACGAATACACACTCTCTTCATCATTTTTCTCTTATGATGTTAAGAGTTTTCACATGATTAGTTTTGATCAAAGAGAGATTGTTGAGTCTTTGGTTGATAAGAATATAATGGGACATGGAGGGTCAGGGACAGTGTACAAAATCGAGCTGAAAACCGGAGATGTTGTGGCGGTTAAGAGGCTTTGGAGTCGAAGTTCGAAGGATTCTTCGCCAGAAGATGCATTATTTGTGGACAAGGCATTGAAAGCTGAGGTGGAAACACTTGGAAGCATAAGACACAAGAACATTGTTAAGTTGTATTGTTGCTTCTCAAGTTTGGATTGTAGCTTGTTGGTTTATGAGTATATGCCAAATGGTACTTTGTATGATTCTCTTCACAAGGGTTGGATTCATTTGGATTGGCCTACAAGGTATAGGATTGCACTTGGAATTGCTCAGGGTGTTGCATACCTTCACCATGATTTGGTTTTTCCTATTATCCATAGAGATATTAAGTCAACAAATATTCTCTTGGATGAAGATTACCATCCTAAGGTTGCAGATTTTGGGATTGCTAAGGTTTTGCAGGCAAGAGGAGCAAAGGATTCCACAACCACGGTCATTGCTGGAACTTATGGTTACCTAGCCCCAGAATATGCATATTCACCAAGAGCAACCACAAAGTGTGATGTGTACAGTTTTGGTGTGATTTTGTTGGAATTATTAACTGGGAGGAAGCCAATTGAGTCAGAATTTGGAGAAAACAGAAACATTGTATTTTGGGTTGCAAACAAAGTTGAAGGCAAAGAAGGAGCTAGACCAAGTGAGGTTTTTGATCCAAAGTTATCATGTTCATTCAAAGATGATATGGTTAAAGTATTAAGGATTGCCATTAGATGCAGCTACAAAGCACCAGCTAGTAGACCAACCATGAAAGAAGTTGTTCAGCTTCTGATTGAGGCAGAGCCAAGAAAATCTGATTCTTGCAAGTTGTCAACCAAAGACGTATCGACAAATGTCACCTTAGTAAAGAAATCATTTGAATTATAA 2898 0.3796 MNHHQPFFFFGLIVIISMTNMSHVISTNQSEFFSLMKESLSGNYPFDWGVSKVDKPICDFTGITCDNKGDIISLDFSGWSSLSGNFPSNICSYLPNLRVLNLGNTKFKFPTNSIINCSHLELLNMNKMHLSGTLPDFSSLKYLRVLDLSYNSFTGDFPMSVFNLTNLEILNFNENSKLNLWELPKSFVRLRSLKSMILSTCMLHGQIPPSISNITTLIDLELSGNFLTGQIPKELGLLKNLQQLELYYNYFLVGSIPEELGNLTELVDLDMSVNKLTGTIPSSVCKLPKLQVLQFYNNSLTGEIPKSIENSKTLRILSLYDNFLSGHVPAKLGQSSGMVVLDLSENKLSGPLPEHVCQGGKLLYFLVLDNFFSGVIPESYSNCMFLLRFRVSNNRLEGSVPKGLLSLSHVSIIDLSSNNLTGPIPEINGNSRNLSELFLQRNKISGQITPTISSAYNLVKIDFSYNFLSGPIPSEIGNLRKLNLLMLQANKLNSSIPDSFSSLESLNLLDLSSNLLTGNIPESLSVLLPNSINFSHNLLSGPIPPKLIKGGLVESFAGNPGLCVMMPVNANSSDQRNFPLCSHGYKSKKMNTIWVAGVSVILIFVGAALFLKKRCGKNVSAVEHEYTLSSSFFSYDVKSFHMISFDQREIVESLVDKNIMGHGGSGTVYKIELKTGDVVAVKRLWSRSSKDSSPEDALFVDKALKAEVETLGSIRHKNIVKLYCCFSSLDCSLLVYEYMPNGTLYDSLHKGWIHLDWPTRYRIALGIAQGVAYLHHDLVFPIIHRDIKSTNILLDEDYHPKVADFGIAKVLQARGAKDSTTTVIAGTYGYLAPEYAYSPRATTKCDVYSFGVILLELLTGRKPIESEFGENRNIVFWVANKVEGKEGARPSEVFDPKLSCSFKDDMVKVLRIAIRCSYKAPASRPTMKEVVQLLIEAEPRKSDSCKLSTKDVSTNVTLVKKSFEL* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4139 965 Gene3D Ribonuclease Inhibitor 252 345 IPR032675 -
Mtr3g4139 965 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR1 7 946 - -
Mtr3g4139 965 SUPERFAMILY RNI-like 70 349 - -
Mtr3g4139 965 SMART serkin_6 654 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4139 965 Pfam Protein kinase domain 656 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4139 965 ProSiteProfiles Protein kinase domain profile. 654 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4139 965 Gene3D Ribonuclease Inhibitor 28 179 IPR032675 -
Mtr3g4139 965 Gene3D Ribonuclease Inhibitor 180 251 IPR032675 -
Mtr3g4139 965 Gene3D Phosphorylase Kinase; domain 1 637 738 - -
Mtr3g4139 965 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 946 - -
Mtr3g4139 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Mtr3g4139 965 Gene3D Ribonuclease Inhibitor 346 574 IPR032675 -
Mtr3g4139 965 SUPERFAMILY Protein kinase-like (PK-like) 638 934 IPR011009 -
Mtr3g4139 965 SUPERFAMILY L domain-like 254 567 - -
Mtr3g4139 965 Gene3D Transferase(Phosphotransferase) domain 1 739 960 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4139 Mtr-Chr3 55210882 55214566 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4139 26 940 Receptor kinase-like Gene Family AT5G49660 64.853 0.0 1202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr3g4139 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4139 - - lja:Lj1g3v2096140.1 1528.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4139 3 55210882 55214566 Mtr3g4139 3 55210882 55214566 ECH