Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4122 ATGGCCATCGCAACAGAGACTCAACCTCAGCCTCATCAACAACACCATACGTTGCAGGCTTCTTCGGAGGTATCAGGTTCAGCTAAGGATCAAAGAAGGTGGATTCTAAATGATTTTGATATTGGAAAACCTCTTGGTAGGGGCAAATTCGGCCATGTCTATTTGGCCAGAGAAAAAACTAGTAATCATATCGTTGCGTTGAAAGTACTCTTTAAGAGCCAATTGCAACAATCTCAAGTTGAGCATCAGCTTCGCAGAGAAGTTGAAATACAGAGTCATCTGCGACACCCTCACATCTTGCGCCTTTATGGATACTTTTATGATCAGAAACGAGTTTACTTGATTTTAGAGTATGCACCCAAAGGTGAACTTTACAAGGAATTGCAGAAATGCAAATATTTCAGTGAAAGACGCGCAGCTACTTATGTTGCATCATTGGCTCGAGCCCTTATATATTGCCATGGAAAGCATGTCATACACAGGGACATTAAACCAGAGAACCTTCTTATTGGTGCACAGGGTGAACTTAAGATAGCGGATTTTGGGTGGTCAGTGCACACATTCAATCGCAGGCGGACCATGTGCGGCACACTGGATTACCTTCCACCTGAGATGGTGGAGAGTGTAGAACATGATGCGAGTGTGGATATATGGAGCCTTGGTGTCCTTTGCTATGAGTTTCTTTATGGAGTTCCCCCTTTTGAGGCTAAAGAACATTCTGATACTTATAGGAGGATAATTCAAGTGGATCTCAAGTTCCCTCCTAAACCAATCGTTTCTTCTGCTGCCAAAGACCTCATCAGCCAGATGCTGGTCAAGGATTCCTCTGAACGACTACCATTGCACAAACTCCTAGAACACCCTTGGATTGTTCAGAATGCAGAGCCCTCCGGTATATACAGGAGCTAG 909 0.44 MAIATETQPQPHQQHHTLQASSEVSGSAKDQRRWILNDFDIGKPLGRGKFGHVYLAREKTSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSERLPLHKLLEHPWIVQNAEPSGIYRS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4122 302 Gene3D Phosphorylase Kinase; domain 1 26 122 - -
Mtr3g4122 302 ProSiteProfiles Protein kinase domain profile. 39 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4122 302 CDD STKc_Aurora 38 291 - -
Mtr3g4122 302 SUPERFAMILY Protein kinase-like (PK-like) 27 294 IPR011009 -
Mtr3g4122 302 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 1 301 IPR030616 GO:0004672
Mtr3g4122 302 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524
Mtr3g4122 302 Pfam Protein kinase domain 41 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4122 302 MobiDBLite consensus disorder prediction 1 26 - -
Mtr3g4122 302 PIRSF ILK 7 287 - -
Mtr3g4122 302 SMART serkin_6 39 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4122 302 PANTHER SERINE/THREONINE-PROTEIN KINASE AURORA-1 1 301 - -
Mtr3g4122 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Mtr3g4122 302 Gene3D Transferase(Phosphotransferase) domain 1 123 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4122 Mtr-Chr3 54981354 54984217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4122 29 296 CBL-interacting serine-threonine protein kinases AT5G10930 35.273 5.62e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Mtr3g4122 Pkinase 1.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4122 K08850 - gmx:100803678 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4122 3 54981354 54984217 Mtr3g4122 3 54981354 54984217 ECH