Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4105 ATGGATGAGTACGATAGTGGTGGCCGTAGTGCCGATAAAGCTCCGGGAGCCGAAGAAGAAGGGAGTGCAACTCCACTTCCTGAGAAGATTCAAGTTGGTGGTTCCCCATTATATAGATTAGATAGGAAACTTGGGAAGGGAGGATTTGGGCAAGTCTATGTTGGTCGCCGCGTAGGAGCTGGTTCTGGTGCCGTTGAGGTAGCATTAAAATTCGAGCATAGAAACAGCAAAGGGTGCAATTACGGACCTCCACATGAATGGCAGGTTTACAGCACATTAGGTGGTAGTCATGGTGTTCCACGAGTACATTACAAGGGACGGCAAGGTGACTACTACATTATGGTCATGGATATGCTTGGCTCTAGTCTATGGGATGTTTGGAATAACAACTCACACACGATGTCTACCGAAATGGTGGCATGTATTGCAATCGAGGCTATCTCTATATTGGAGAAGATGCATTGTAGAGGATATGTGCATGGTGATGTAAAGCCTGAAAACTTTTTGCTTGGACCCTCGGGAACCCCTGATGAGAAAAAGTTGTTTCTGGTTGATCTTGGATTAGCAACTCGTTGGCGTGATAGTTCAACTGGCCTTCATGTTGATTATGATCAACGCCCAGATGTATTTAGGGGCACAGTTCGTTATGCTAGTGTGCATGCACATCTTGGTAGAACAAGTAGCAGGAGAGATGACTTGGAATCCCTTGCTTACACACTTGTCTTCCTTCTTCGTGGTCGGTTACCTTGGCAAGGATATCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCCACTTCACCCGAAGCTTTGTGTTGCTTTTGTCCTGCACCTTTCCGGCAGTTTGTAGAATATGTAGTAAATTTGAAGTTTGATGAAGAACCAAATTATGCAAAATACATATCCCTTTTTGATGGAATTGTGGGTCCAAATCCTGACATTAGGCCCCTAAATACCGAGGGTGCTCAGAAGCTTATATGTCAGGTTGGACAAAAGAGAGGACGATTGACCATGGAAGAGGATGATGATGAACAACCAAAGAAGAAGGTCCGAATGGGTCAGCCAGCAACACAGTGGATTAGTGTTTACAATGCTCGTAGACCAATGAAGCAAAGGTATCATTACAATGTGGCCGATGAGCGGCTTTCCCAACACATTGTAAAAGGAAATGAAGATGGTTTATTTATTAGCAGTGTGGCTTCTTGTGCTAGTCTTTGGGCACTCATTATGGACGCTGGCACTGGTTTCACATCACAAGTTTACGAACTCTCTTCCAGTTTTCTTCACAAGGAATGGATTATGGAACAGTGGGATAAGAATTATTACATCAGTGCCATAGCTGGAGCTAGTAACGGGTCCTCATTGGTTGTAATGTCAAAAGGGACCCAATACATGCAACAATCCTATAAAGTCAGTGACTCGTTTCCATTTAAGTGGATCAACAAAAAATGGAGGGAAGGATTTTTTGTCACTGCTATGGCCACTGCTGGCACTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTACAGAGCAGGTTGTGGAACTTGATTTCCTGTACCCTAGTGAAGGTATTCATCGAAGGTGGGAAAACAATTACCGCATTACTGCAACTGCTGCAACGCCTGATCAAGCTGCTTTTATTTTAAGTGTCCCAAGAAGAAAACCACCTGATGAAACTCAAGAAACGCTCCGCACGTCTGATTTTCCTAGTACTCATGTTAAGGAAAAATGGGCAAAGAACCTCTATATCGCATCTATTAGTTATGGGAGAACAGTTTCATAA 1797 0.4368 MDEYDSGGRSADKAPGAEEEGSATPLPEKIQVGGSPLYRLDRKLGKGGFGQVYVGRRVGAGSGAVEVALKFEHRNSKGCNYGPPHEWQVYSTLGGSHGVPRVHYKGRQGDYYIMVMDMLGSSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHCRGYVHGDVKPENFLLGPSGTPDEKKLFLVDLGLATRWRDSSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTSSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPEALCCFCPAPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPLNTEGAQKLICQVGQKRGRLTMEEDDDEQPKKKVRMGQPATQWISVYNARRPMKQRYHYNVADERLSQHIVKGNEDGLFISSVASCASLWALIMDAGTGFTSQVYELSSSFLHKEWIMEQWDKNYYISAIAGASNGSSLVVMSKGTQYMQQSYKVSDSFPFKWINKKWREGFFVTAMATAGTRWAIVMSRGAGFTEQVVELDFLYPSEGIHRRWENNYRITATAATPDQAAFILSVPRRKPPDETQETLRTSDFPSTHVKEKWAKNLYIASISYGRTVS* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4105 598 Pfam Protein kinase domain 38 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4105 598 MobiDBLite consensus disorder prediction 1 16 - -
Mtr3g4105 598 PANTHER - 16 572 - -
Mtr3g4105 598 SMART serkin_6 38 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4105 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Mtr3g4105 598 PANTHER CASEIN KINASE-RELATED 16 572 - -
Mtr3g4105 598 CDD STKc_CK1 38 307 - -
Mtr3g4105 598 ProSitePatterns Protein kinases ATP-binding region signature. 44 70 IPR017441 GO:0005524
Mtr3g4105 598 Gene3D Transferase(Phosphotransferase) domain 1 8 361 - -
Mtr3g4105 598 MobiDBLite consensus disorder prediction 1 32 - -
Mtr3g4105 598 SUPERFAMILY Protein kinase-like (PK-like) 38 311 IPR011009 -
Mtr3g4105 598 ProSiteProfiles Protein kinase domain profile. 38 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4105 Mtr-Chr3 54820390 54827285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4105 37 250 EF-hand Containing Proteins AT4G04720 26.147 1.63e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mtr3g4105 Pkinase 9.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4105 - - gmx:100800125 1112.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4105 3 54820390 54827285 Mtr3g4105 3 54820390 54827285 ECH
Mtr3g4105 3 54820390 54827285 Mtr7g2343 7 39908069 39914671 PCT