Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4097 ATGGCCAAAGAAACTCCAGCAACGTTTTCAAAGTTCCTTAATTTTATTTGCCTTTTCATGTTCATGCTCAACTTCCACTCAACTCATGGAGAACAAGAGTTTGAGCTTCTCTTATCCTTCAAAGCATCCATCAAATTCGATCCACTAAACTTTCTCTCCAACTGGGTCAACACTTCCTCCGACACTATCTGCAAGTGGCACGGCATAACTTGCGACAACTGGTCGCACGTTAACACCGTGTCACTCTCAGGTAAAAACATCTCCGGTGAGGTTTCCTCGTCAATTTTCCAACTTCCACACGTTACAAACCTCGACCTCTCAAACAACCAGCTTGTTGGAGAAATTGTTTTCAACTCTCCTTTTCTCTCTTCACTTCTTTACCTCAATCTAAGCAACAACAACCTCACTGGCCCCTTACCTCAATCCTTATTTTCATCATCCTTTATCAATCTCGAGACTCTTGATCTCTCAAACAACATGTTTTCAGGCAAAATACCTGATCAAATTGGATTGCTTTCAAGTTTAACATATGTTGATCTAGGTGGCAATGTTTTGGTTGGAAAAATTCCAAATTCCATCACCAACCTCACAAGTTTAGAGTCCTTAACTTTGGCTTCAAACCAATTAATAGGTGAGATTCCAACAAAGATATGCCTAATGAAGAGGTTGAAATGGATTTACTTGGGATACAACAATCTTTCAGGAGAGATACCAAAGAACATTGGAAACTTAGTTTCATTGAATCACCTTAATCTTGTTTACAACAATCTCACAGGACCAATTCCTGAATCACTTGGAAACCTCACAAATCTTCAATATCTCTTTCTCTACCTAAACAAACTCACCGGCCCAATTCCCAAATCCATTTTCAATTTGAAAAACCTCATTTCACTTGATCTCAGTGATAATTATCTTTCAGGAGAGATTTCAAACCTTGTTGTCAACCTTCAAAAACTAGAGATTCTTCATCTCTTCTCAAACAACTTCACAGGTAAAATTCCAAACACCATAACATCTTTACCACACCTTCAAGTTCTTCAACTCTGGTCAAACAAATTAACAGGTGAAATTCCACAAACACTTGGAATACACAACAACCTCACAATTCTTGATCTCTCTTCCAACAACCTCACAGGCAAAATCCCAAACAGTTTATGTGCGTCCAAAAATCTTCACAAAATTATCCTCTTTTCAAACTCTCTCAAAGGTGAAATCCCAAAAGGATTAACCTCTTGCAAAACCTTAGAAAGAGTGAGACTCCAAGACAACAATTTATCAGGAAAATTGCCATTGGAAATCACCCAATTGCCTCAGATATACCTGTTGGATATCTCTGGAAACAAATTTTCTGGAAGAATCAATGATAGAAAATGGAATATGCCATCACTTCAAATGCTTAATTTGGCTAACAACAACTTCTCAGGTGATTTACCAAACTCTTTTGGTGGTAACAAAGTTGAAGGATTAGACTTATCACAGAATCAATTTTCTGGTTACATTCAAATTGGTTTCAAAAATTTACCAGAGCTTGTTCAATTGAAACTCAACAACAACAACCTCTTCGGTAAATTCCCAGAAGAACTTTTTCAATGCAACAAACTTGTTTCATTAGATTTAAGCCATAATCGGTTAAACGGCGAGATTCCTGAAAAACTCGCCAAAATGCCGGTTCTTGGTCTACTTGACATATCAGAGAATCAATTTTCCGGTGAAATTCCAAAGAATTTAGGAAGCGTTGAATCGCTTGTTGAAGTTAACATCTCATATAACCATTTTCATGGCGTTTTACCTTCTACTGAAGCTTTCTCTGCAATCAATGCAAGTTTAGTTACCGGTAACAAACTCTGTGACGGTGACGGTGATGTTTCTAACGGTTTGCCACCATGCAAAAGTTACAATCAGATGAACTCAACAAGGTTGTTTGTTTTAATTTGTTTTGTATTAACAGCGTTGGTTGTTTTGGTTGGTACTGTCGTGATTTTCGTGCTGAGAATGAACAAGAGTTTTGAAGTTAGAAGAGTGGTTGAAAATGAAGATGGAACTTGGGAAGTGATTTTCTTCGATTATAAGGCTTCTAAATTTGTTACAATTGAGGATGTTTTGTCTTCGGTAAAAGAAGGAAAAGTTATCACGAAAGGAAGAAACTGGGTTTCGTACGAAGGAAAGTGTGTTTCGAACGAAATGCAATTTGTTGTGAAAGAAATAAGTGACACGAATTCTGTTTCCGTTAGTTTTTGGGATGATACGGTGACGTTTGGTAAAAAAGTGAGACATGAGAATATTGTTAAGATTATGGGAATGTTTAGGTGTGGTAAAAGAGGGTATTTGGTTTATGAGTTTGTAGAAGGGAAGAGTTTAAGGGAAATTATGCATGGTTTGAGTTGGTTAAGGAGATGGAAAATTGCTTTGGGGATTGCAAAAGCTATTAATTTTTTGCATTGTGAATGTTTGTGGTTTGGTTTGGGGAGCGAAGTGTCGCCGGAGACGGTTTTGGTCGACGGAAAGGGTGTTCCTCGCCTTAAGCTTGACTCTCCCGGAATAGTAGTAACGCCGGTTATGGGTGTCAAAGGTTTTGTTTCTTCAGCCTACGTTGCTCCAGAGGAAAGAAATGGGAAAGATGTGACAGAGAAGAGTGAGATATATGGTTTTGGAGTTATCCTGATTGAGTTATTAACAGGAAGAAACTCTGTAGACATAGAAGCATGGAATGGTATTCATTACAAGAATAATATTGTTGAGTGGGCCCGTTATTGTTACTCTGACTGTCATCTAGACACGTGGATAGATTCTGTTGTAATGAAGGGTGAAGATTCATCGACCTATCAAAACGACATTGTTGAAACCATGAATCTTGCACTTCACTGTACCGCAAATGATCCCACCACAAGGCCATGCGCAAGAGATATACTCAAAGCCCTAGAGACTGTTCACTGCAACACAGCCACTCTTTGCTGA 2955 0.3831 MAKETPATFSKFLNFICLFMFMLNFHSTHGEQEFELLLSFKASIKFDPLNFLSNWVNTSSDTICKWHGITCDNWSHVNTVSLSGKNISGEVSSSIFQLPHVTNLDLSNNQLVGEIVFNSPFLSSLLYLNLSNNNLTGPLPQSLFSSSFINLETLDLSNNMFSGKIPDQIGLLSSLTYVDLGGNVLVGKIPNSITNLTSLESLTLASNQLIGEIPTKICLMKRLKWIYLGYNNLSGEIPKNIGNLVSLNHLNLVYNNLTGPIPESLGNLTNLQYLFLYLNKLTGPIPKSIFNLKNLISLDLSDNYLSGEISNLVVNLQKLEILHLFSNNFTGKIPNTITSLPHLQVLQLWSNKLTGEIPQTLGIHNNLTILDLSSNNLTGKIPNSLCASKNLHKIILFSNSLKGEIPKGLTSCKTLERVRLQDNNLSGKLPLEITQLPQIYLLDISGNKFSGRINDRKWNMPSLQMLNLANNNFSGDLPNSFGGNKVEGLDLSQNQFSGYIQIGFKNLPELVQLKLNNNNLFGKFPEELFQCNKLVSLDLSHNRLNGEIPEKLAKMPVLGLLDISENQFSGEIPKNLGSVESLVEVNISYNHFHGVLPSTEAFSAINASLVTGNKLCDGDGDVSNGLPPCKSYNQMNSTRLFVLICFVLTALVVLVGTVVIFVLRMNKSFEVRRVVENEDGTWEVIFFDYKASKFVTIEDVLSSVKEGKVITKGRNWVSYEGKCVSNEMQFVVKEISDTNSVSVSFWDDTVTFGKKVRHENIVKIMGMFRCGKRGYLVYEFVEGKSLREIMHGLSWLRRWKIALGIAKAINFLHCECLWFGLGSEVSPETVLVDGKGVPRLKLDSPGIVVTPVMGVKGFVSSAYVAPEERNGKDVTEKSEIYGFGVILIELLTGRNSVDIEAWNGIHYKNNIVEWARYCYSDCHLDTWIDSVVMKGEDSSTYQNDIVETMNLALHCTANDPTTRPCARDILKALETVHCNTATLC* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4097 984 ProSiteProfiles Protein kinase domain profile. 704 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4097 984 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Mtr3g4097 984 PANTHER - 13 979 - -
Mtr3g4097 984 Gene3D Phosphorylase Kinase; domain 1 689 780 - -
Mtr3g4097 984 SUPERFAMILY RNI-like 285 594 - -
Mtr3g4097 984 Pfam Protein kinase domain 708 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4097 984 ProSiteProfiles Leucine-rich repeat profile. 366 388 IPR001611 GO:0005515
Mtr3g4097 984 SUPERFAMILY L domain-like 42 382 - -
Mtr3g4097 984 SUPERFAMILY Protein kinase-like (PK-like) 680 978 IPR011009 -
Mtr3g4097 984 Gene3D Transferase(Phosphotransferase) domain 1 781 982 - -
Mtr3g4097 984 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 13 979 - -
Mtr3g4097 984 Gene3D Ribonuclease Inhibitor 383 620 IPR032675 -
Mtr3g4097 984 ProSiteProfiles Leucine-rich repeat profile. 150 172 IPR001611 GO:0005515
Mtr3g4097 984 Gene3D Ribonuclease Inhibitor 182 283 IPR032675 -
Mtr3g4097 984 Gene3D Ribonuclease Inhibitor 284 382 IPR032675 -
Mtr3g4097 984 SMART LRR_typ_2 98 119 IPR003591 -
Mtr3g4097 984 SMART LRR_typ_2 122 146 IPR003591 -
Mtr3g4097 984 SMART LRR_typ_2 244 267 IPR003591 -
Mtr3g4097 984 SMART LRR_typ_2 340 364 IPR003591 -
Mtr3g4097 984 SMART LRR_typ_2 268 292 IPR003591 -
Mtr3g4097 984 SMART LRR_typ_2 196 220 IPR003591 -
Mtr3g4097 984 SMART LRR_typ_2 460 483 IPR003591 -
Mtr3g4097 984 SMART LRR_typ_2 148 172 IPR003591 -
Mtr3g4097 984 SMART LRR_typ_2 507 531 IPR003591 -
Mtr3g4097 984 SMART LRR_typ_2 366 388 IPR003591 -
Mtr3g4097 984 Pfam Leucine Rich Repeat 366 386 IPR001611 GO:0005515
Mtr3g4097 984 Gene3D Ribonuclease Inhibitor 29 181 IPR032675 -
Mtr3g4097 984 Pfam Leucine rich repeat 150 209 IPR001611 GO:0005515
Mtr3g4097 984 Pfam Leucine rich repeat 487 544 IPR001611 GO:0005515
Mtr3g4097 984 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4097 Mtr-Chr3 54759198 54763575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4097 18 974 Receptor kinase-like Gene Family AT2G25790 49.949 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Mtr3g4097 Pkinase 1.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4097 - - gmx:100777118 1331.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4097 3 54759198 54763575 Mtr3g4097 3 54759198 54763575 ECH