Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4091 ATGGAGTCTGTTGCCTCCAATTCCAATTCAACAACACCAAATAACAACAACAATAATAACCGTCCCCGTCCCTATCGTTTCAAACACAGCCAACCAATATCAGACAGAATAGTAAGAGCCCTCCGTCACGGTCTCCGTCTCCTCCACCGTTCCGGCTCCACCTTCTTCATCTTCGGCGCAACCGGTAACGTCTACACAGTAACCTTATCTTCCACACCCTCGTGCACGTGCCCGGACCGGACAACACCATGCAAACACATCCTCTTCGTTATGATTCGAGTATTAGGCGTTTCACAAAACGACGCTTGTGTCCGTAGAAAAAACCTTCGACCATGTCATCTTCAACGCTTGTTAAACATGCCAACGTTGCAAGAAGCAGTTGCAGGGTTTACATTACGACAGAGGTTTCATCAGATGTTCTTTGAAGGAGGGTCGAAGAAGGAGAATATAGAGATGGAAGATGGTACCACGTGTCCAGTTTGTCTTGAAGAGATGGAGAAGGAAGAGAGGTTGGTGGCTTGTGGAACATGTAAGAATGTTATTCATGAAGAGTGTTTGACGAGATGGAAGAGAAGTAGTGGACGAAGATCGGCTAGTTGTGTGATTTGTAGGGCAAGGTGGAGGGATAGAAATGAACAAGATAAGTATGTTAATCTATCTGCTTATATTAGTGAGGAAGATATGTTGGCACAACCTTATGGGGACATTTGCACTAGTTAG 720 0.4514 MESVASNSNSTTPNNNNNNNRPRPYRFKHSQPISDRIVRALRHGLRLLHRSGSTFFIFGATGNVYTVTLSSTPSCTCPDRTTPCKHILFVMIRVLGVSQNDACVRRKNLRPCHLQRLLNMPTLQEAVAGFTLRQRFHQMFFEGGSKKENIEMEDGTTCPVCLEEMEKEERLVACGTCKNVIHEECLTRWKRSSGRRSASCVICRARWRDRNEQDKYVNLSAYISEEDMLAQPYGDICTS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4091 239 ProSiteProfiles Zinc finger RING-CH-type profile. 150 210 IPR011016 GO:0008270
Mtr3g4091 239 MobiDBLite consensus disorder prediction 1 25 - -
Mtr3g4091 239 Pfam Ring finger domain 157 204 IPR001841 -
Mtr3g4091 239 SUPERFAMILY RING/U-box 148 209 - -
Mtr3g4091 239 ProSiteProfiles Zinc finger SWIM-type profile. 65 95 IPR007527 GO:0008270
Mtr3g4091 239 ProSiteProfiles Zinc finger RING-type profile. 158 204 IPR001841 -
Mtr3g4091 239 PANTHER - 1 228 - -
Mtr3g4091 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 142 222 IPR013083 -
Mtr3g4091 239 Pfam SWIM zinc finger 65 93 IPR007527 GO:0008270
Mtr3g4091 239 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 1 228 IPR039903 GO:0061630
Mtr3g4091 239 MobiDBLite consensus disorder prediction 1 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4091 153 214 C3H Transcription Factor Family AT3G58720 37.097 3.01e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4091 - - var:108321788 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4091 3 54698310 54699835 Mtr3g4091 3 54698310 54699835 ECH