Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4077 ATGGAGTGGGTCGTTGGCGGAAAGTTTAAGATTGGTCGCAAAATCGGTAGCGGTTCATTTGGTGAAATTTATATAGCCTCAGATATGGATACCTCTGAGGTCGTTGCCGTCAAAATGGAGAAGAAGAGAACAAGGCATCCACAACTATTGTATGAGGCCAAATTATACAGTCTTCTCCAAGGAGAAAGTGGTATTCCAAGTATGAGATGGTGCGGTACTGATGGAGATCATAATATTCTGGTTATGGATCTTCTGGGACGTAGCCTGGAGGACCTTTTTGTCTTCTGCGGGAGCAAGTTTACTTTAAAAACAGTTTTGATGTTAGCAGACCAGATGCTTTCGAGAATAGAGTACATGCATTCCAAGGGTTTTTTACATAGAGATATCAAACCAGATAACTTCCTAATGGGTATTAGGAGAAAATCAAGTCAGGTTTATATTATTGATTTCGGACTAGGAAAAAGATATCGGGACCCCAAAACAAGCAAGCATATTCCTTATAGAGAGAATAAAAGTTTAACAGGGACGGCACGATATGCAAGTTGCAATACTCACTTAGGAATCGAGCAAGGTCGTCGTGATGATTTGGAGTCTATTGGCTATGTCCTTATGTACTTCTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAAAGCTGTCACCAAAGAGGAAAAATATGAAAAGATTCGCGAGAAGAAGTTATCAACTTCCATAGAGAAGCTTTGCGAATCATATCCCGTGGAGTTTGCGTCTTACTTTCATTATTGTCGCTCCTTGACATTTGATCAAGATCCAGATTATGGATTCTTAAAGCGTCTGTTTCGTGAGTTGTTCACTCGTGAAGGATATGACTATGACAATTTATTCGACTGGACCATCCTAAAATATCAGCAGACGCAACAGACAAGGAGACAAAAGCAATCATCGCCTTCGGATGCCGTACCTAGTGCTGTGCCTAGCAGTCTACAACCAGTGGTTATGGAAAAACATACAGGAATCAATAATTCACCTCAAGTTACCGTAACAAAACTGCTAACCAATCTTGATCGTCCAAATGTGCGTGTGCAGCCTAAGCCATCCAATCTTAAGAATCTAAATGCCAAGAATCATACCGGAAAACATAATGTGAACAACGATCCATCCACTTCATCCGCTTTGCCCAAATCGACTGCAGAAAATGTCTCCAAGCCTGAAAGGCCCACAGGAAGTTCAAACCTAGGTCGTGTATTTGGGAATAACTCCCATATTTCAAGCAGCTGGATTCCTTCTTTACGGCGAATATCTTCTACCAAATAG 1293 0.4145 MEWVVGGKFKIGRKIGSGSFGEIYIASDMDTSEVVAVKMEKKRTRHPQLLYEAKLYSLLQGESGIPSMRWCGTDGDHNILVMDLLGRSLEDLFVFCGSKFTLKTVLMLADQMLSRIEYMHSKGFLHRDIKPDNFLMGIRRKSSQVYIIDFGLGKRYRDPKTSKHIPYRENKSLTGTARYASCNTHLGIEQGRRDDLESIGYVLMYFLRGSLPWQGLKAVTKEEKYEKIREKKLSTSIEKLCESYPVEFASYFHYCRSLTFDQDPDYGFLKRLFRELFTREGYDYDNLFDWTILKYQQTQQTRRQKQSSPSDAVPSAVPSSLQPVVMEKHTGINNSPQVTVTKLLTNLDRPNVRVQPKPSNLKNLNAKNHTGKHNVNNDPSTSSALPKSTAENVSKPERPTGSSNLGRVFGNNSHISSSWIPSLRRISSTK* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4077 430 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mtr3g4077 430 Pfam Protein kinase domain 10 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4077 430 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4077 430 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr3g4077 430 MobiDBLite consensus disorder prediction 346 416 - -
Mtr3g4077 430 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 415 - -
Mtr3g4077 430 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mtr3g4077 430 Gene3D Transferase(Phosphotransferase) domain 1 1 331 - -
Mtr3g4077 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mtr3g4077 430 PANTHER CASEIN KINASE-RELATED 1 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4077 Mtr-Chr3 54554396 54560287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4077 8 213 EF-hand Containing Proteins AT4G36070 27.700 7.16e-16 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mtr3g4077 Pkinase 7.6e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4077 K08960 K08959 gmx:100792736 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4077 3 54554396 54560287 Mtr1g0003 1 71916 76544 PCT