Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4037 ATGGAGAAGGAGAGGACCAAGGATATAGAATTAATGGAAGAAAGTGGTGGAAAAGAGGAAACCCTACCACCGGGATTTCGATTTCATCCTACAGATGAAGAACTCATCACTTGCTATCTCATAAACAAGATATCAGATTCTAGTTTTACAGGCAAAGCAATAACTGATATAGATCTCAACAAATCTGAACCATGGGAGCTACCAGGGAAGGCAAAGATGGGAGAAAAGGAATGGTACTTTTTCAATATGAGAGATCGTAAATATCCAACCGGTGTGAGAACGAATCGAGCAACAAACACCGGATACTGGAAGACCACAGGGAAAGACAGAGAAATCTTCGACAGTGTTACATCGGAGTTGGTTGGAATGAAGAAGACATTGGTCTTTTACAAAGGCAGAGCTCCTCGAGGAGAGAAAAGTAATTGGGTCATGCATGAATACCGTATTCACTCTAAATCCACCTTTAGAACAAACAAGGATGAATGGGTGATTTGTCGGATTTTCAAGAAGAGTGGCAGTGGAAAAAAGTACCCTTGTAATTCTAGTTCCAACAACAATACAAGAGCAGGATTGAATCCTTATAGCATGCATGAAATAGGTCCTAATAACATAAATCTGATATCGATGCCACCACCACCAATGATGCAGTATCTGCATGAAGATTTTCCTTCTGCTCCTCGTAATTTCCTTTACGGACGGAATCAGCATAATAATAATTACATCAACTGTAGTACTACCGCACCAATGATGCAATATTCCCAGTTGAACTACCCTGCATCTTCAGCAACAGTAGGAGAAGGATTCAGCATTTCAGGGCTTAATTTGAACCTTGGATCGGGCGGAGGAGGAGGAGCTACCACAACAACACAAACCACTTTGCGGCCAATGCAACATTCCCCACATTTTGCTCATGCAACAATGAATAGTTATGTTGATGCAGATCAGAATATTATTAATAATATTGGAGTACTAGAAACCATGAGCAACAGCAATAATGACTCAAATGGTAATAGGTACATGGGAATGGAGAACTGCATTAATGGTCTAGATACTTACTGGCCTAATTCCTACTAA 1074 0.4041 MEKERTKDIELMEESGGKEETLPPGFRFHPTDEELITCYLINKISDSSFTGKAITDIDLNKSEPWELPGKAKMGEKEWYFFNMRDRKYPTGVRTNRATNTGYWKTTGKDREIFDSVTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSTFRTNKDEWVICRIFKKSGSGKKYPCNSSSNNNTRAGLNPYSMHEIGPNNINLISMPPPPMMQYLHEDFPSAPRNFLYGRNQHNNNYINCSTTAPMMQYSQLNYPASSATVGEGFSISGLNLNLGSGGGGGATTTTQTTLRPMQHSPHFAHATMNSYVDADQNIINNIGVLETMSNSNNDSNGNRYMGMENCINGLDTYWPNSY* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4037 357 Gene3D NAC domain 31 174 IPR036093 GO:0003677|GO:0006355
Mtr3g4037 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 350 - -
Mtr3g4037 357 MobiDBLite consensus disorder prediction 1 26 - -
Mtr3g4037 357 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 17 350 - -
Mtr3g4037 357 ProSiteProfiles NAC domain profile. 22 170 IPR003441 GO:0003677|GO:0006355
Mtr3g4037 357 SUPERFAMILY NAC domain 19 170 IPR036093 GO:0003677|GO:0006355
Mtr3g4037 357 MobiDBLite consensus disorder prediction 1 17 - -
Mtr3g4037 357 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4037 Mtr-Chr3 54056165 54058357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4037 13 355 NAC Transcription Factor Family AT2G24430 47.934 1.03e-97 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr3g4037 NAM 9.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4037 - - lja:Lj1g3v2035130.1 399.438