Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4034 ATGGCAACGACAGAATCGGATCTTGATGAGTTTTTGAATCTCGATTATGAGTTTCGGTATCCAAGTCTTGCCGATACGGAGGCTTTCATGACCGGAGTTTGCTCCGCCGCTTTCCAAACTCTTCTTCTACCGGATGTTGTGAGTTCATTTTCAACTTGTGGTGGACTAACAAACTCCCAAAACTTTACTCCCAAACACTCCACCATCACTGCTTCTCAGTCATCTATTTATGGCACTGTTGGAAGCCCAGTTTCAGCTAATAAACCAAACAGCAGAGAGAATCATATCAAAGGGACAGCAAGTGGTTCATCGGATCCATCCGATGAAGATAATGAATCAGGTCCTTGTGAACAAATTACAAATCCAGTTGATATGAAACGCCAAAGAAGGAAGGATTCTAATTGCGAGTCAGCCAGGAGGTCAAGGTGGAGAAAACAAGCGCATTTGTCTGAACTTGAGGCTCAGGTTGAAAAACTGAAACTGGAAAATGCAACACTATATAAACAGTTTACTGATACCAGTCAACAATTTCATGAGGCTGATACAAATAACCGAGTGCTAAAATCAGATGTTGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAGGATATGGTCACTAGAAGCTCTTTCACCACATCACTAAATAATCAATTTCTTCATAATCAATGTCAAATGAGCACACCACCACAACTCAACATTCGCCGCATGCCACATGTTTCGCCAACCATCAACTTCCAGCAGGGAAATAGTGCCTCATACGGTGGTGTTGCGGTTGGCGTGCACAATTCAAATCTTGCTGGGTTTGGAAACTTGGACATGACTTACAATGATGTCGTCGACAATGGGGTCCTAAGCAATGCTATGAGTTGTGTGACTATTTGGCCTTAA 888 0.4268 MATTESDLDEFLNLDYEFRYPSLADTEAFMTGVCSAAFQTLLLPDVVSSFSTCGGLTNSQNFTPKHSTITASQSSIYGTVGSPVSANKPNSRENHIKGTASGSSDPSDEDNESGPCEQITNPVDMKRQRRKDSNCESARRSRWRKQAHLSELEAQVEKLKLENATLYKQFTDTSQQFHEADTNNRVLKSDVEALRAKVKLAEDMVTRSSFTTSLNNQFLHNQCQMSTPPQLNIRRMPHVSPTINFQQGNSASYGGVAVGVHNSNLAGFGNLDMTYNDVVDNGVLSNAMSCVTIWP* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4034 295 MobiDBLite consensus disorder prediction 123 141 - -
Mtr3g4034 295 SUPERFAMILY Leucine zipper domain 125 177 IPR046347 GO:0003700|GO:0006355
Mtr3g4034 295 PANTHER BASIC LEUCINE ZIPPER 63 1 295 - -
Mtr3g4034 295 Gene3D - 125 182 - -
Mtr3g4034 295 Pfam bZIP transcription factor 125 171 IPR004827 GO:0003700|GO:0006355
Mtr3g4034 295 Coils Coil 142 169 - -
Mtr3g4034 295 MobiDBLite consensus disorder prediction 72 118 - -
Mtr3g4034 295 MobiDBLite consensus disorder prediction 72 141 - -
Mtr3g4034 295 PANTHER BZIP TRANSCRIPTION FACTOR 1 295 - -
Mtr3g4034 295 Coils Coil 184 204 - -
Mtr3g4034 295 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 129 144 IPR004827 GO:0003700|GO:0006355
Mtr3g4034 295 CDD bZIP_plant_GBF1 127 178 IPR045314 GO:0003700|GO:0006355
Mtr3g4034 295 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 124 187 IPR004827 GO:0003700|GO:0006355
Mtr3g4034 295 SMART brlzneu 122 186 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4034 Mtr-Chr3 54028083 54032399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4034 72 295 bZIP Transcription Factor Family AT5G24800 46.581 4.17e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr3g4034 bZIP_1 4.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4034 K25784 - gmx:780555 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4034 3 54028083 54032399 Mtr1g0107 1 1159622 1165088 PCT