Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4022 ATGGATCCACCAAAGAAACCTAACAAAATCAGAGAAATCGTTAGACTTCAACAGATCCTTAAGAAATGGAGAAGAGTAGCCAATACTTCAAAAACATACAGAAGCAGCAGCATCAACAACAACAGTACTACTAGTAAAAGCATAAAGTTTTTGAAAAGAACACTTTCAATGTCCGAACGGGAAGGAGGAGGATCAAACAACGCAGTTCCTAAAGGCTACCTAGCCGTTTGTGTTGGTGTAGACCTTAACAGGTTTGTTATACCAACCGAGTATTTGGCTCATCAAGCCTTTCATATATTACTCAGAGAAGCTGAAGAAGAATTTGGGTTTGAACAAACTGGTGTTCTGAGAATTCCTTGTGAAGTTTCAGTGTTTGAGAGTATCTTGAAGATGGTTGAAGGAAAGGATAGATTTTCTACTCAGAAATGTAGATTTGGCATTGAAAAGATGATGGGATACTGTTCCTCAAACCAACTTGGTTATTATCATCAACCTCATAGTCCAATGTGCAGATAG 516 0.3818 MDPPKKPNKIREIVRLQQILKKWRRVANTSKTYRSSSINNNSTTSKSIKFLKRTLSMSEREGGGSNNAVPKGYLAVCVGVDLNRFVIPTEYLAHQAFHILLREAEEEFGFEQTGVLRIPCEVSVFESILKMVEGKDRFSTQKCRFGIEKMMGYCSSNQLGYYHQPHSPMCR* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4022 171 PANTHER OSJNBA0060N03.10 PROTEIN 6 171 - -
Mtr3g4022 171 Pfam Auxin responsive protein 22 132 IPR003676 GO:0009733
Mtr3g4022 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 171 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4022 Mtr-Chr3 53947707 53948535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4022 5 171 Calmodulin-binding Proteins AT4G31320 54.167 1.28e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4022 K14488 - gmx:100527662 282.722