LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr3g4018	ATGTGGTTGCCAAAGAATTCATCAGAGAACAAGGAAGGGGTAAAGGGGTTAATAGCAGTGGCAATTGACAAAGAAAAGGGAAGCCAAAATGCACTCAAATGGGTTGTTGACAATCTCCTCACAAGAAATGCAACTGTAATTCTCATCCATGTCAGGGTTTCGGCACCTTCTCTTCCTTCATCACCTTCTTTTTTCACCATAAGGTCAGGGATAAATGCTAATGGCTTAACAATATGTAAAGAACCAGAAGCTCAAAACAAAAACATTTTCCTCCCATATCGCGTCTTCTGTACACGCAAAGATATACAATGCAAGGATGTACTACTAGAAGATGCAGATGTGTCAAAAGCGTTGATTGAATATGCTTCGCAGGCAGGAATTGAGCATCTGATTCTTGGCTCTTCAACAAAAACTAGTTTGCTCAAATTCAAGGTATCAGATATTCCTGGAACAGTGTCAAAAGGGGCACCAGATTTTTGTACAGTCTATGTCATTGGCAAAGGAAAGATTCAATCGATGCGATCTGCTTCTCGTCCTGCTCCGAACATTTCCCCTCTACAAGTTAGTCAAACTACTATCGAACAAGACCAATCAGACATAAATTTGGTGTTGGAGCAAAGTGAAAAAGAACAAGCAAGGAATTCCTATGATGCTGCACAACGCAAATTGCAAGATGGAACAGATTCATTCAGGTCACCATTCACTAGGAAAGGTTACAATACCAAACAATATATGGAAAATTATAAGCCAGATGGTGACATATCTTTTGTAAGCTCTGGAAGGTCGAGTACGGACCGCATGTTGCCTCCATTGCATAACAACTCAGAGCCAGGCCCTTGGATATCATGTAGCTCAGAATCAGATGTAAACTACAGCTTTGAGTCTATCATTCACGGAAGGATGTCTTTGGAATCAACCATCCCTACCGAATTTACATCACTCTCATTTGATAGCGAAAGGCTTTCATCTTCTTCGTCACAGGCCGTGGATGACATGGAGGCTGAAATGAGAAGATTAAAGTTGGAGCTCAAGCAAACAATGGAAATGTACAACACAGCATGTAAAGAAGCACTCACAGCACAACAGAAGGCAGTAGAACTTCAAAAATGGAAATTAGAAGAAGAAAGGAGATTGGAAGAGGCAAGGATGGCCGAGGAATCTGCATTGGCAATTGCAGAAAAGGAGAAAGAAAAATCTAAAGCAGCCATTGAGGCCGCTGAAGCACAAAAAAGGATAGCAGAACTAGAAGCACAGAAGAGACTTCATGCAGAGATGAAAGCAGTTAGAGAAGCAGAAGAGAAAAAAAAAGTAATGGATGCTTTAGTAAATGTAGATGTCAGGTATAGAAAGTATACAATTGAGGAAATTGAAGCTGCAACAAATTTTTTTTCACAATCCCTCAAGATTGGAGAAGGAGGATATGGTCCAGTTTTTAAGTGCCTTCTGGACCATACACCTGTTGCAGTCAAGGTTCTACGCCCCGATGCAGCACAAGGACGATCGCAGTTTCAACGCGAGGTTGAGGTACTGAGCTGCATACGGCATCCAAACATGGTTCTCCTCTTAGGAGCCTGTCCGGAATATGGATGTCTAGTGTATGAGTACATGTCAAATGGAAGCTTGGAAGATTGCCTATTTCGTCGAGGCAACAGTCCTTCACTTTCTTGGCAGCTAAGGTTCAAAATTGCAGCCGAAATCGGAACCGGCTTGTTATTCCTTCACCAAACAAAACCAGAACCTATAGTACATAGAGACTTGAAACCAGGAAACATCTTGCTAGACAGAAACTATGTAGCCAAAATTAGTGATGTTGGTTTGGCAAGACTTGTTCCGCCATCTGTGGCCGACAGTGTGACGCAATATCGCATGACGGCAACAGCAGGAACATTCTGTTATATAGATCCTGAGTATCAGCAAACAGGAATGTTAGGTGTGAAATCAGATGTATATTCACTTGGAATCATTTTCCTTCAAATTTTGACAGCAAAATCACCAATGGGTTTGGCACATAACGTTGACAGAGCTATTGAGAAAGGAACATTTACTGAGATGTTGGATCCTACAGTGACTGATTGGCCAATGGAGGATGTTTTGAGATTAGCAAAAATTGCGGTCCAGTGTGCCGAGTTAAGGCGAAGAGATAGACCTGACCTTGGTAAGGTTGTACTGCCAGAACTTGACAGATTGAGAGAACTTGCTGAGCAAAATTCAACAGATGGTAGTGGCAGTAGCAGCAGCTCTATAAATATGTCCCATGAGAGACAAGTTTCACTGCTTCTGGATGAAAGTTGTCCTCTATTTCCTCACTCTGAGACTGATGAGATTAGAAGAAACACACCAATCAGGTCTGATGAGATTAGAAGAAACACAACAATTGGTTTCTAA	2385	0.4168	MWLPKNSSENKEGVKGLIAVAIDKEKGSQNALKWVVDNLLTRNATVILIHVRVSAPSLPSSPSFFTIRSGINANGLTICKEPEAQNKNIFLPYRVFCTRKDIQCKDVLLEDADVSKALIEYASQAGIEHLILGSSTKTSLLKFKVSDIPGTVSKGAPDFCTVYVIGKGKIQSMRSASRPAPNISPLQVSQTTIEQDQSDINLVLEQSEKEQARNSYDAAQRKLQDGTDSFRSPFTRKGYNTKQYMENYKPDGDISFVSSGRSSTDRMLPPLHNNSEPGPWISCSSESDVNYSFESIIHGRMSLESTIPTEFTSLSFDSERLSSSSSQAVDDMEAEMRRLKLELKQTMEMYNTACKEALTAQQKAVELQKWKLEEERRLEEARMAEESALAIAEKEKEKSKAAIEAAEAQKRIAELEAQKRLHAEMKAVREAEEKKKVMDALVNVDVRYRKYTIEEIEAATNFFSQSLKIGEGGYGPVFKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMSNGSLEDCLFRRGNSPSLSWQLRFKIAAEIGTGLLFLHQTKPEPIVHRDLKPGNILLDRNYVAKISDVGLARLVPPSVADSVTQYRMTATAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQILTAKSPMGLAHNVDRAIEKGTFTEMLDPTVTDWPMEDVLRLAKIAVQCAELRRRDRPDLGKVVLPELDRLRELAEQNSTDGSGSSSSSINMSHERQVSLLLDESCPLFPHSETDEIRRNTPIRSDEIRRNTTIGF*	795

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr3g4018	794	ProSiteProfiles	Protein kinase domain profile.	463	726	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr3g4018	794	PANTHER	UNIVERSAL STRESS FAMILY PROTEIN	5	792	-	-
	Mtr3g4018	794	SMART	serkin_6	463	726	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr3g4018	794	Coils	Coil	329	349	-	-
	Mtr3g4018	794	Gene3D	Transferase(Phosphotransferase) domain 1	536	752	-	-
	Mtr3g4018	794	Coils	Coil	355	435	-	-
	Mtr3g4018	794	Gene3D	HUPs	17	165	IPR014729	-
	Mtr3g4018	794	Coils	Coil	202	229	-	-
	Mtr3g4018	794	Pfam	Universal stress protein family	18	149	IPR006016	-
	Mtr3g4018	794	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	18	165	-	-
	Mtr3g4018	794	SUPERFAMILY	Protein kinase-like (PK-like)	446	722	IPR011009	-
	Mtr3g4018	794	Pfam	Protein kinase domain	465	697	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mtr3g4018	794	MobiDBLite	consensus disorder prediction	769	784	-	-
	Mtr3g4018	794	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	581	593	IPR008271	GO:0004672\|GO:0006468
	Mtr3g4018	794	CDD	STK_N	17	168	-	-
	Mtr3g4018	794	Gene3D	Phosphorylase Kinase; domain 1	442	535	-	-
	Mtr3g4018	794	MobiDBLite	consensus disorder prediction	769	794	-	-
	Mtr3g4018	794	PANTHER	OS02G0152300 PROTEIN	5	792	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr3g4018	Mtr-Chr3	53915263	53920386	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr3g4018	1	758	Receptor kinase-like Gene Family	AT1G78940	55.757	0.0	778

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Mtr3g4018		Pkinase	1.3e-39	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr3g4018	-		-	gmx:100803867	1065.06