Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3982 ATGACGTTGCCATCTCTAGTTAGAAGACGTTCAAGTGGCGAAATAAGGAACTTGGCCTCAATTTCTAGCAGTCTTTTACCAGCATTTGGCACTAATCCTGATGAAGGTTACTTCGACCTAAAAAAATATGTTATTGCTCCCTATGATCGCAGATATAGATTGTGGCAAACGTTCCTAGTGGTATTGGTGGTGTACTCAGCATGGGCATCTCCATTCGAGTTAGCTTTCAGAGAGATGTCAATTGGGTCCATGTTGATTGCTGATCTTGTTGTTGATGCCTTCTTTGCATTTGACATAATCCTGACATTCTTTGTGGCTTACTTGGATAAATCAACTTATTTCCTTGTTGATGACCATAAGAAGATTGCTATCAGGTATGTCAAACATTTATTCTTCCCCATGGATCTAGCTTCCACTCTGCCATTTCAGCAGATATACCAACTTATAGCAGGCAAATCACACGACAGAGGGGAAGTCTTTGGCTTTCTGAACATGCTTAGACTCTGGCGATTGAGGCGTGTTAGTGAGCTCTTCTCAAGGCTAGAGAAAGACATCAGGGTCAGCTACTCAGTAACAAGAGTCTGTAAACTGTTATGCGTTACGCTATTTGCAGTGCACTTCACAGGCTGCGTGTATTTTTGGTTGGCTTTCCATCACAAATCACCCGGAAACACGTGGATTGGGAAGCAGGTAGAGGATTTTAAGCATAGGAGTGTCGGATCGGGTTACACTTACTCCATGTATTGGTCTATTGTAACCCTTACCACTGTTGGCTATGGAGATTTACATGCAGAAAATACAACGGAGAAGGTTTTCAATATTTTTTATATGCTGTTTAACATCGGACTCACTGCATATATTATCGGAAACATGACAAATCTGGTGGTTCATAGCTCTGTCCGAACCTTTGCTATGAGGGACGCCTTCAACAAAATATTACAATATGCGAGCAAAAATGGTCTCCCAGAAGGTTTGAAGGACCAAATGTTGGCACATACACAACTGAAGTTCAAGACAGCAGAGTTACAGCAAGAAGAAGTGCTACAGGACCTACCTAAAGCAATTAGAGCCGGTATTGCTCAGCATCTTTTCCACAACGTAGTTGAAAAAACAAATTTATTTAAAGGAGTCTCAGATGATTTTATATCCCAAATGGTATCAGATATGAAAGCAGAATACTACCCGTCAAAGGTTGACATCATCTTGCAAAATGAGATGCCGGCATATTTCTACATTTTGGTATCTGGATCAGTGGATGTGTTGATATTAAAGAATGGGTCTGAACAGTTTTTGTTCAAACTAGATCCTGGAAGCATGGTAGGAGAAATAGGTGTGATGTTTAATATCCCACAACCTTATACAGTGAGAAGTAGAAGACTATCCCAGCTTATACGAATCGATCATCATCATTTCAAGCAGCTGGTGAAACCATTTAATGAAGATGGGAAGGCAATCATCACCAACTTTACTCAGCATCCGACACAAAATGAGGGCACAAATGATGACATTTCAAAGTACCATGAAGAAAATCCATATGAAGAAGGAGAAACAGAAAATTCCAGTCCTATGTCAAGCCTAGTCCCGATTAGAGTCAAAATCCATGGACATCACCCCAACGAAAACATTGAAAATGGAACAACACCAAAGCTCATTATCCTACCAGATTCAGTCGAAGATCTTCTCAGAGTAGCAGAGTACAAGTTTGGAAAAAGAGGAAGCAAAATTCTTATGGCTGACAGCTCAGAAGTAGAAGATCTATGCGCCCTAAGAGAGGATGACGAGTTATATATCATCTAA 1797 0.4051 MTLPSLVRRRSSGEIRNLASISSSLLPAFGTNPDEGYFDLKKYVIAPYDRRYRLWQTFLVVLVVYSAWASPFELAFREMSIGSMLIADLVVDAFFAFDIILTFFVAYLDKSTYFLVDDHKKIAIRYVKHLFFPMDLASTLPFQQIYQLIAGKSHDRGEVFGFLNMLRLWRLRRVSELFSRLEKDIRVSYSVTRVCKLLCVTLFAVHFTGCVYFWLAFHHKSPGNTWIGKQVEDFKHRSVGSGYTYSMYWSIVTLTTVGYGDLHAENTTEKVFNIFYMLFNIGLTAYIIGNMTNLVVHSSVRTFAMRDAFNKILQYASKNGLPEGLKDQMLAHTQLKFKTAELQQEEVLQDLPKAIRAGIAQHLFHNVVEKTNLFKGVSDDFISQMVSDMKAEYYPSKVDIILQNEMPAYFYILVSGSVDVLILKNGSEQFLFKLDPGSMVGEIGVMFNIPQPYTVRSRRLSQLIRIDHHHFKQLVKPFNEDGKAIITNFTQHPTQNEGTNDDISKYHEENPYEEGETENSSPMSSLVPIRVKIHGHHPNENIENGTTPKLIILPDSVEDLLRVAEYKFGKRGSKILMADSSEVEDLCALREDDELYII* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3982 598 MobiDBLite consensus disorder prediction 490 523 - -
Mtr3g3982 598 ProSiteProfiles KHA domain profile. 530 598 IPR021789 -
Mtr3g3982 598 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 3 53 - -
Mtr3g3982 598 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 54 492 - -
Mtr3g3982 598 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 496 597 - -
Mtr3g3982 598 Pfam Ion transport protein 53 297 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr3g3982 598 CDD CAP_ED 373 486 IPR000595 -
Mtr3g3982 598 Gene3D Jelly Rolls 338 501 IPR014710 -
Mtr3g3982 598 Gene3D - 53 297 - -
Mtr3g3982 598 PANTHER POTASSIUM CHANNEL AKT1 496 597 IPR045319 GO:0005249|GO:0006813
Mtr3g3982 598 PANTHER POTASSIUM CHANNEL AKT1 54 492 IPR045319 GO:0005249|GO:0006813
Mtr3g3982 598 PANTHER POTASSIUM CHANNEL AKT1 3 53 IPR045319 GO:0005249|GO:0006813
Mtr3g3982 598 SMART cnmp_10 373 490 IPR000595 -
Mtr3g3982 598 Pfam Cyclic nucleotide-binding domain 395 476 IPR000595 -
Mtr3g3982 598 ProSiteProfiles cAMP/cGMP binding motif profile. 373 492 IPR000595 -
Mtr3g3982 598 PRINTS EAG/ELK/ERG potassium channel family signature 88 98 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr3g3982 598 PRINTS EAG/ELK/ERG potassium channel family signature 99 108 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr3g3982 598 PRINTS EAG/ELK/ERG potassium channel family signature 243 260 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr3g3982 598 PRINTS EAG/ELK/ERG potassium channel family signature 269 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr3g3982 598 PRINTS EAG/ELK/ERG potassium channel family signature 287 296 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr3g3982 598 SUPERFAMILY Voltage-gated potassium channels 47 295 - -
Mtr3g3982 598 Pfam KHA, dimerisation domain of potassium ion channel 530 597 IPR021789 -
Mtr3g3982 598 SUPERFAMILY cAMP-binding domain-like 302 491 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3982 Mtr-Chr3 53497361 53504589 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3982 8 597 Ion Channels AT4G32650 57.987 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3982 K21867 - gmx:100794620 871.692