Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3965 ATGGGTGTGGATTACTATAACATTTTGAAGGTGGATAAAAATGCTACAGAAGATGATTTGAAGAAAGCATATAGAAAATTGGCTATGAAATGGCACCCTGACAAGAACCCTAACAATAAAAAAGAAGCTGAAGCCCGTTTCAAACAGATCTCTGAGGCTTATGCGGTATTGAGTGATCCGCAAAGAAGGAATGTTTATGATCAGCTTGGAGAACAAGGGTTAAAAGAAAGGCCATCACCAGAAACTGAGTCACCAAGTGGATTTTATCCAAGAAGTGCAGAGGATATCTTTGCAGAATTCTTTGGAAGTAGTCCTTTGAATTTTGGATCATCTGGACCAGGGAGGTCCAAGAGATTTCCATCTGATGGTGGAGCAGGAAATGGTGGATTCAGTGGCGATTTAAATTCTAGAACACATAGCGAAAGAGCGAATATGCCAAAGAAACCACCACCTGTTGAGACTAAATTGCCTTGTAGTTTGGAGGAGCTGTATTCTGGTTCTACAAGGAAAATGAAGATCTCAAGAACTGTAGTGGATGCCTATGGAAGGGAAATTAAAGAAACAGAGATATTAAGCATTGAAGTAAAGCCAGGATGGAAGAAAGGAACAAAGATAACATTCCCAGATAAAGGGAATCAACTAATAAACCAACTTCCAGCAGATCTTGTATTTGTGATTGATGAGAAGCCTCATGAATTGTTCAAGAGAGATGGGAATGACCTTATTGTGAATCAAAAGATATCACTAGCAGAAGCTATTGGTGGAACTTCAGTAAATATCAAAACACTTTACAAACGTAGTTTAAGTGTCCCAGTGAAAAACATTGTGAGTCCTGGTTATGAGCTTGTTGTTGCAAATGAAGGAATGCCAATAACAAAGGAACCCGGTCATAGGGGTGATTTGAGGATCATATTTGAGGTTAAGTTCCCAACAAAATTGACACCAGAACAACGTGCTGCACTAAAGCGAGCATTGGGTGGTTAA 984 0.3943 MGVDYYNILKVDKNATEDDLKKAYRKLAMKWHPDKNPNNKKEAEARFKQISEAYAVLSDPQRRNVYDQLGEQGLKERPSPETESPSGFYPRSAEDIFAEFFGSSPLNFGSSGPGRSKRFPSDGGAGNGGFSGDLNSRTHSERANMPKKPPPVETKLPCSLEELYSGSTRKMKISRTVVDAYGREIKETEILSIEVKPGWKKGTKITFPDKGNQLINQLPADLVFVIDEKPHELFKRDGNDLIVNQKISLAEAIGGTSVNIKTLYKRSLSVPVKNIVSPGYELVVANEGMPITKEPGHRGDLRIIFEVKFPTKLTPEQRAALKRALGG* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3965 327 MobiDBLite consensus disorder prediction 109 155 - -
Mtr3g3965 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 234 320 IPR008971 GO:0006457|GO:0051082
Mtr3g3965 327 CDD DnaJ_C 150 313 - -
Mtr3g3965 327 SUPERFAMILY Chaperone J-domain 3 108 IPR036869 -
Mtr3g3965 327 CDD DnaJ 4 59 IPR001623 -
Mtr3g3965 327 Pfam DnaJ domain 4 67 IPR001623 -
Mtr3g3965 327 SMART dnaj_3 3 62 IPR001623 -
Mtr3g3965 327 Pfam DnaJ C terminal domain 152 310 IPR002939 -
Mtr3g3965 327 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Mtr3g3965 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 151 232 IPR008971 GO:0006457|GO:0051082
Mtr3g3965 327 Gene3D - 230 326 - -
Mtr3g3965 327 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 327 - -
Mtr3g3965 327 Gene3D DnaJ domain 3 110 IPR036869 -
Mtr3g3965 327 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Mtr3g3965 327 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 327 - -
Mtr3g3965 327 Gene3D - 151 229 - -
Mtr3g3965 327 PRINTS DnaJ domain signature 6 24 IPR001623 -
Mtr3g3965 327 PRINTS DnaJ domain signature 24 39 IPR001623 -
Mtr3g3965 327 PRINTS DnaJ domain signature 42 62 IPR001623 -
Mtr3g3965 327 PRINTS DnaJ domain signature 62 81 IPR001623 -
Mtr3g3965 327 MobiDBLite consensus disorder prediction 70 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3965 Mtr-Chr3 53370734 53372894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3965 5 74 C2H2 Transcription Factor Family AT1G74250 37.838 9.45e-09 54.7