Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3951 ATGGAAGAAATTGAAGGTGTGAATTGTTTCAGTGAAGGTAGAAGCTCTAGTGAGACTCGACCTCCAAATCCTAATTCATCTATTGCTTCTGCTTTTCGTCAATGTCAACGCAATGATCCTCTTGTTTTACCATGCAGAAAATCTCTTGTTCGCCACGCTTCTCTTACGAAAATGAAGTTGTCTGATGTATCTGCTGAGGATGTTACTGAAGGTTTCCAGTCTGATTTCCTTCCAAAGCTCCGTTCCGGAGGATGTGCTGATATAGGGTTCCGGTCAAATATGGAGGATGTGTATGTTTGTGTTGACAATTTTAGGCAGGGCCATGGGCTCAACAAACATATAGATGGACCAAGTGCTTTCTATGGGGTGTTTGATGGGCACGGTGGAAAGCATGCTGCTGACTTTGCTTGCAATCATTTGCCAAAGTTCATTCTCGAGGATAAAGATTTCCCAGTGGATATTGAAAGGATAGTTGCTTCCGCCTTTCTGCAAACAGACTATGCATTTGCGGAAGCTTGTTCTCTCAATGCTGCCCTTGCATCCGGCACCACTGCTTTGGCCACTCTTGTTATAGGAAGGTTGTTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGCCGTCGTGGAAAAGCAATTGACATGTCAAGAGACCACAAACCAGGTTGCATGAAAGAGCAGAGGCGTATCGAGGCATCTGGGGGGTCTGTCTACGATGGGTATCTTAACGGGCAACTTAATGTTGCTCGAGCTATTGGTGACTGGCACATGGAAGGAATGAAAGGCAAAGATGGTGGACCACTCAGTGCAGAGCCTGAGCTCATGACTACAAAACTTACTGCCGAGGACGAATTTCTCATCATAGGCTGCGATGGGATTTGGGATGTTTTTAGAAGCCAAAATGCTGTAGATTTTGCACGGCGCAGGCTTCAGGAGCATAACGACCCAGCTGTTTGCAGCAAGGATCTGGTTGATGAGGCCTTGAAGAGAAAAAGTGGAGACAATTTAGCGGTTGTTGTGGTTTGCTTTCAGCAGCAGCCTCCACCGAATTTGGTAGCACCACGCTCCAGAGTGCACAGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTTTTGGATAGCTTGGCAAAATAA 1143 0.4646 MEEIEGVNCFSEGRSSSETRPPNPNSSIASAFRQCQRNDPLVLPCRKSLVRHASLTKMKLSDVSAEDVTEGFQSDFLPKLRSGGCADIGFRSNMEDVYVCVDNFRQGHGLNKHIDGPSAFYGVFDGHGGKHAADFACNHLPKFILEDKDFPVDIERIVASAFLQTDYAFAEACSLNAALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIDMSRDHKPGCMKEQRRIEASGGSVYDGYLNGQLNVARAIGDWHMEGMKGKDGGPLSAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAVCSKDLVDEALKRKSGDNLAVVVVCFQQQPPPNLVAPRSRVHRSFSAEGLKELQSFLDSLAK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3951 380 MobiDBLite consensus disorder prediction 10 26 - -
Mtr3g3951 380 Gene3D - 61 348 IPR036457 -
Mtr3g3951 380 Pfam Protein phosphatase 2C 83 336 IPR001932 -
Mtr3g3951 380 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Mtr3g3951 380 SUPERFAMILY PP2C-like 74 346 IPR036457 -
Mtr3g3951 380 MobiDBLite consensus disorder prediction 1 26 - -
Mtr3g3951 380 CDD PP2Cc 81 344 IPR001932 -
Mtr3g3951 380 SMART PP2C_4 71 342 IPR001932 -
Mtr3g3951 380 PANTHER PROTEIN PHOSPHATASE 2C 62 366 IPR015655 GO:0004722|GO:0006470
Mtr3g3951 380 ProSiteProfiles PPM-type phosphatase domain profile. 81 344 IPR001932 -
Mtr3g3951 380 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 62 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3951 Mtr-Chr3 53230747 53233610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3951 1 378 PP2C-type Phosphatase Gene Family AT2G25620 66.667 0.0 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3951 K14803 - gmx:100815725 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3951 3 53230747 53233610 Mtr3g3951 3 53230747 53233610 ECH