Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3942 ATGGGCGCACCATTTGAGGGAATCATTCAAGATGTCAAAGGAAGAGTTAAATGCTATAAACAAGATTGGGTCTGCGCAATCTGTTCCGGCGTTAGCATATTGGCTCCAACTTTCTACATATTTTCTGCGTCCGCTCTTCCGGTTATTGCTTTCGGAGAACAACTTAGTAGGGATACAGATGGAAGCTTGAGCACTGTAGAAACATTGGCATCTACTGCCATTTGTGGAATTATTCATTCAATTATAGGTGGCCAACCTTTGTTGATTTTAGGAGTTGCAGAACCAACTGTTATAATGTACACTTATCTCTACACTTTCTGCAAAAATACACCTCAATTGGGTACCAAGCTCTTTCTAGCTTGGGCTGGTTGGGTTTGTGTTTGGACGGCATTGATGTTAATTTTGCTTGCAATTTTCAATGCTTGCAATATTATCACTAGATTTACAAGAATTGCAGGGGAGTTATTTGGCATGCTAATCACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGACTGGTAGGCGAGTTCAGCACTCCCAAGGTTGAAAATCCTTCGTCGGAGGAATTGCAATTCCAATGGCGGTATACCAATGGACTACTTGCAGTCATTTTCTCTTTTGGGCTAATTGTCACTGCAGTTAAAAGCAGAAAAGCAAGAACATGGCGATATGGATCAAGGAGGCTGCGAGGCTTTATTGCAGATTATGGTGTTCCAGTGATGGTAGTGTTGTGGACTGCAGTATCTTATATAATGCCCGATGACATTCCAAATGGTGTTCCTAGAAGGCTGTTTTGTCCACTTCCCTGGGAACCTGCATCTCTTTATCACTGGACAGTAGTGAAGGATATGTGGAAGGTACCCGTGGTTTATATATTTGGGGCAATTATTCCAGCTTTGATGATAGCAGGTTTATACTTTTTCGATCATAGCGTGGCCTCTCAGATGGCACAACAGAAAGAATTCAACCTTCAAAAGCCATCTGCCTACCATTATGATGTTTTCCTACTTGGAATAATGACTCTGATTTGTGGCCTCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCTCCCATGCATACAAAGAGTTTGGCAGTTCTTAGGAGGCAGCTGATCCGAAAGAGGGTTGTGAAAAGCGCCAAGGAATGCATGGAACAACAGAGTACCAGCTCTGAATTATATGGAAAAATGCAAGCTGTGTTCATTGAAATGGATACAGCCCCTACCGTTAAAGAATTGGAGACTTTGAAAGAAGCTGTAATGAAATCTGATACCAAGGGTTGTGCAATGGAACCTTTTGATCCTGAGAAATACATAGATACTTATTTACCAGTCCGAGTTAATGAACAAAGAATGACCAACTTATTGCAGTCCCTCCTGATTGGTTTATCGATAATAGGCATCTCTGTTATCAAAAGGATACCAACCTCGGTTTTATGGGGATATTTTGCTTACATGGCAATAGATAGTCTTCCGGGGAATCAGTTCTGGGAAAGGATATTGCTCCTCTTTGTCACCCCAAGCCGGCGTTTCAAAATATTGCAAGATACACATGCCTCATTTGTGGAGACAGTACCATTCAAGACCATAGCTGGATTTACAGCCTTACAGTTGGCATATTTTCTGTTCTGTTTCGGGGTCACATGGATACCGATAGGTGGAATATTGTTTCCGCTACCATTCTTCCTTCTCATAATTCTAAGAGAACGCCTCCTTCCAAAGATATTCAAGCCTAACCATCTTCAGGAACTTGATGCTTCTGAGTATGAGGAAATTATTGGCGCTCCATGTGCTGTACGTAGTATGTCACTCAGGGATAGGGAGCCACGTGATAGTGATAATGATGGAAGCTCGGAAGATTACTATGATGCAGAGATATTGGATGAGATGACAACCAACAGGGGAGAGTTGAAACTTAGAACTGTAAGCTTCAATGATCGAAACCGCAGCAACAGCTTTAATGATCGAAACCACAGTAACAGCTTCAATGATCGAAACCACAGTAACAGCTTCAATGAAGACAGACACAATTAA 2037 0.4192 MGAPFEGIIQDVKGRVKCYKQDWVCAICSGVSILAPTFYIFSASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSIIGGQPLLILGVAEPTVIMYTYLYTFCKNTPQLGTKLFLAWAGWVCVWTALMLILLAIFNACNIITRFTRIAGELFGMLITVLFFQEAIKGLVGEFSTPKVENPSSEELQFQWRYTNGLLAVIFSFGLIVTAVKSRKARTWRYGSRRLRGFIADYGVPVMVVLWTAVSYIMPDDIPNGVPRRLFCPLPWEPASLYHWTVVKDMWKVPVVYIFGAIIPALMIAGLYFFDHSVASQMAQQKEFNLQKPSAYHYDVFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLRRQLIRKRVVKSAKECMEQQSTSSELYGKMQAVFIEMDTAPTVKELETLKEAVMKSDTKGCAMEPFDPEKYIDTYLPVRVNEQRMTNLLQSLLIGLSIIGISVIKRIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRRFKILQDTHASFVETVPFKTIAGFTALQLAYFLFCFGVTWIPIGGILFPLPFFLLIILRERLLPKIFKPNHLQELDASEYEEIIGAPCAVRSMSLRDREPRDSDNDGSSEDYYDAEILDEMTTNRGELKLRTVSFNDRNRSNSFNDRNHSNSFNDRNHSNSFNEDRHN* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3942 678 PANTHER BORON TRANSPORTER-LIKE PROTEIN 1 678 - -
Mtr3g3942 678 MobiDBLite consensus disorder prediction 650 678 - -
Mtr3g3942 678 Pfam HCO3- transporter family 4 185 IPR011531 GO:0006820|GO:0016021
Mtr3g3942 678 Pfam HCO3- transporter family 446 536 IPR011531 GO:0006820|GO:0016021
Mtr3g3942 678 Pfam HCO3- transporter family 195 388 IPR011531 GO:0006820|GO:0016021
Mtr3g3942 678 MobiDBLite consensus disorder prediction 650 668 - -
Mtr3g3942 678 PANTHER ANION EXCHANGE PROTEIN 1 678 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3942 Mtr-Chr3 53160067 53164747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3942 4 662 Antiporters AT4G32510 66.915 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3942 K24194 - gmx:100787412 1063.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3942 3 53160067 53164747 Mtr3g3942 3 53160067 53164747 ECH
Mtr3g3942 3 53160067 53164747 Mtr1g0200 1 2274119 2278378 ECH
Mtr1g0200 1 2274119 2278378 Mtr3g3942 3 53160067 53164747 PCT