Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3927 ATGGCCGTCGCGAACCAGTGTTTATCATATACCCGTTTCGTCACAGTCAGAGGAACCCAATCCTCTCCTTTGCAGCGAAAACCTCTTCTCTTCTCCTTCACTCTTCCTTCTCGCTCTCAAAACCTCTACTCTTCAATTGTCACCGCCTCTTCCAAAAAGAAAAACAATAAGAAAAAATTGACTCATGTTACCAAGGGGAATGAAGAGGAGGAGGAGGAGGAGGAGGAGGATGCTTTTGAGTTGCTATTCAAGAAACTTGAAGAAGATCTCAAAAACGATGATGATTTGTCTAAAGATGATAGCGATGAGGACGACGAGATAAGTGAAGAAGATTTTGCTTTGTTAGAACGTGAGTTGGAAGGTGTGTTGGGTGATTTTGATGCTGAATTGTTGAACACAGATATCAGCGAAACACAAGGTGATAATGATGTAGAGAAAAGTAGCGGTGATGGAAATGAGAATTCGCTGAAGCTTAGAACTTGGCAATTAAATATGTTGGCTAGAGCATTGAAAACTGGACGCCGCAAACTAAGTATAAAAGCTCTTGCTGCCGAGCTCTGTCTTGATAGAGCTCTTGTTCTTGATTTGCTTCGTAACCCTCCCCCGAGTCTTCTGATGCTGAGCCTATCGATTCCTGATGAACCTAAACCATCAGCAGTATCACCTGAAACTACGCCCGGAGATTCTTTTTATAAAGAAACAAGTGCAGATCATGCTCATGCAGAATCTGGACCGAAGAAGTCTAACTTACCTATTCATGACATGCAACAGAATTGGTCTTCTCGAAAGAGATTGAAAAAGGCTCAACTTGACACGCTGGAGAGAGTTTACATGAGATCAAAGCGGCCCACTAATGCAATGATTAGTAATATTGTGCATGTTTCAAACATTCCGCGGAGAACTGTTATCAAGTGGTTTGAAGACAAACGTGCCGAGGAGGGGGTTCCAGAACATCGTCTTCCTTACCAGCAGTCTGCTAATGAAACAAGTTGA 993 0.427 MAVANQCLSYTRFVTVRGTQSSPLQRKPLLFSFTLPSRSQNLYSSIVTASSKKKNNKKKLTHVTKGNEEEEEEEEEDAFELLFKKLEEDLKNDDDLSKDDSDEDDEISEEDFALLERELEGVLGDFDAELLNTDISETQGDNDVEKSSGDGNENSLKLRTWQLNMLARALKTGRRKLSIKALAAELCLDRALVLDLLRNPPPSLLMLSLSIPDEPKPSAVSPETTPGDSFYKETSADHAHAESGPKKSNLPIHDMQQNWSSRKRLKKAQLDTLERVYMRSKRPTNAMISNIVHVSNIPRRTVIKWFEDKRAEEGVPEHRLPYQQSANETS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3927 330 Coils Coil 69 89 - -
Mtr3g3927 330 ProSiteProfiles 'Homeobox' domain profile. 256 316 IPR001356 GO:0003677
Mtr3g3927 330 MobiDBLite consensus disorder prediction 135 154 - -
Mtr3g3927 330 SMART HOX_1 258 320 IPR001356 GO:0003677
Mtr3g3927 330 Gene3D - 257 321 - -
Mtr3g3927 330 CDD homeodomain 259 311 IPR001356 GO:0003677
Mtr3g3927 330 PANTHER HOMEOBOX PROTEIN 8 37 327 - -
Mtr3g3927 330 MobiDBLite consensus disorder prediction 57 78 - -
Mtr3g3927 330 SUPERFAMILY Homeodomain-like 257 323 IPR009057 -
Mtr3g3927 330 MobiDBLite consensus disorder prediction 208 261 - -
Mtr3g3927 330 Pfam Homeodomain 261 312 IPR001356 GO:0003677
Mtr3g3927 330 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 37 327 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mtr3g3927 Homeodomain 2.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3927 - - gmx:100798718 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3927 3 53049692 53053062 Mtr3g3927 3 53049692 53053062 ECH