Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3908 ATGATGTGTTCAAGAGTGAGTAACCGTATTGTGCGGTGCGCATCAGGTGGCGAAAACAGTTATCCCGCCAAATTACAACCGTCATGTTTGTCAACTGTTAAGTTTCGCTCCAACAAGCCCAACGACCATGCTTCTTCAGATGTTTCAAGTAGCAGTAGGAGAGCGGTCATATTCAGCAGCATAGCTACGTTGCCATGTCTTCTTCCCCTCACTCATATATTTGGTTCTCTTCAAGCTAACGCCATGCCACCAGGTACAAAAGAATATCTTCTGATTAAAGAAGAGTTGAGGAAGGTATTGACAAAGGGAAAGGCTGCAGGTGTGCTTCGTTTGGTTTTCCATGATGCTGGAACTTTTGAAATTGATGACAACACAGGTGGTATGAATGGTTCTATAGTCTATGAACTTGAAAGACCTGAAAATACTGGTCTGAAAAAATCAGTAAAGGTTCTACAAAAAGCAAAGACTCAGATAGATGCTATCCATCCAGTATCCTGGGCGGACGTTATTGCTGTGGCTGGAACTGAAGCAGTTGAAGTATGTGGAGGTCCTACTATCACAGTTTCGCTCGGCAGACAAGACTCGCCGGGGCCTGATCCTGAAGGGAAACTTCCTGAGGAAACTCTTGATGCTTCTGGTTTGAAGAGATGCTTCCATAAAAAAGGATTTTCAACACAAGAACTAGTAGCTTTGTCTGGAGCCCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCTACTTCTTTTGACAATTCATATTATAAGGTTCTTTTGGAGAAGCCATGGACGCCTTCTGGTGGTATGTCGACTATGATTGGTCTTCCTTCAGATCACGCACTGGTTGAGGACGATGAATGCTTAAGATGGATTAAAAAATACGCAGAGAATGAGAATATGTTCTTTGAAGATTTCAAAAACGTGTATGTCAAGCTGGTGAATTCTGGTGTGAAGTGGAATAGCTTATAA 963 0.4268 MMCSRVSNRIVRCASGGENSYPAKLQPSCLSTVKFRSNKPNDHASSDVSSSSRRAVIFSSIATLPCLLPLTHIFGSLQANAMPPGTKEYLLIKEELRKVLTKGKAAGVLRLVFHDAGTFEIDDNTGGMNGSIVYELERPENTGLKKSVKVLQKAKTQIDAIHPVSWADVIAVAGTEAVEVCGGPTITVSLGRQDSPGPDPEGKLPEETLDASGLKRCFHKKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLEKPWTPSGGMSTMIGLPSDHALVEDDECLRWIKKYAENENMFFEDFKNVYVKLVNSGVKWNSL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3908 320 ProSiteProfiles Plant heme peroxidase family profile. 105 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 25 317 - -
Mtr3g3908 320 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 25 317 IPR044831 GO:0004601|GO:0034599
Mtr3g3908 320 SUPERFAMILY Heme-dependent peroxidases 102 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 227 237 IPR019793 -
Mtr3g3908 320 Gene3D Peroxidase, domain 2 205 307 - -
Mtr3g3908 320 PRINTS Plant ascorbate peroxidase signature 105 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 PRINTS Plant ascorbate peroxidase signature 123 133 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 PRINTS Plant ascorbate peroxidase signature 163 181 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 PRINTS Plant ascorbate peroxidase signature 182 194 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 PRINTS Plant ascorbate peroxidase signature 203 220 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 PRINTS Plant ascorbate peroxidase signature 221 242 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 PRINTS Plant ascorbate peroxidase signature 291 315 IPR002207 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 Pfam Peroxidase 94 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 ProSitePatterns Peroxidases active site signature. 105 116 IPR019794 GO:0004601
Mtr3g3908 320 PRINTS Haem peroxidase superfamily signature 105 119 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 PRINTS Haem peroxidase superfamily signature 164 181 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 PRINTS Haem peroxidase superfamily signature 182 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 PRINTS Haem peroxidase superfamily signature 227 242 IPR002016 GO:0004601|GO:0006979|GO:0020037
Mtr3g3908 320 Gene3D - 93 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3908 Mtr-Chr3 52918145 52923051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3908 92 312 Peroxidase AT1G14550 30.909 1.34e-22 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3908 K00434 - gmx:100792735 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3908 3 52918145 52923051 Mtr3g3908 3 52918145 52923051 ECH