Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3853 ATGGCTGTGTTCTCAAGAACTGCTTCTGCTTCTCTATTGTTCTTGTTCCTTCTCTTTGGTTTCTCTGCAGCTAAGGAACTATTGGTTGGAGGCAAGATAGATGCATGGAAGGTTCCATCTTCTGAAACAGACTCACTCAATCAATGGGCAGAAAAGTCTCGTTTCAAAGTCGACGATCATCTTGTATGGAAATATGATGGAGGGAAAGACTCAGTTTTGCAAGTAAACAAAGAAGATTATGCTAATTGCAACAGCTCAAACCCCATTGAACAGTACAATGATGGGAACACGAAGGTGAAGCCAGACAGACCTGGACCATTTTACTTCATCAGTGGAGCAAAGGGTCACTGTGAGCAGGGACAAAAGCTCATTGTGGTGGTTATGTCTCCAAAGAAAAGATCCATTGGAGTTTCACCTGCACCATCTCCAGCAGAGTTGGAAGAAGGTCCAGCTGTTGCACCAACTAGCAGTGCGCCAGTGTTGCGAACTGGACTTGTGACTGTTTTAGGACTGTTGGCTATTTATGTGGGTTTTCTCATATGA 543 0.4401 MAVFSRTASASLLFLFLLFGFSAAKELLVGGKIDAWKVPSSETDSLNQWAEKSRFKVDDHLVWKYDGGKDSVLQVNKEDYANCNSSNPIEQYNDGNTKVKPDRPGPFYFISGAKGHCEQGQKLIVVVMSPKKRSIGVSPAPSPAELEEGPAVAPTSSAPVLRTGLVTVLGLLAIYVGFLI* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3853 180 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Mtr3g3853 180 PANTHER EARLY NODULIN-LIKE PROTEIN 3 8 173 - -
Mtr3g3853 180 PANTHER BLUE COPPER PROTEIN 8 173 IPR039391 GO:0009055
Mtr3g3853 180 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Mtr3g3853 180 Gene3D - 23 132 IPR008972 -
Mtr3g3853 180 CDD OsENODL1_like 25 128 IPR041846 -
Mtr3g3853 180 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3853 Mtr-Chr3 52306959 52307788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3853 11 172 Phytocyanin Superfamily AT2G25060 55.215 4.38e-60 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3853 - - gmx:100305551 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3853 3 52306959 52307788 Mtr3g3853 3 52306959 52307788 ECH