Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3850 ATGGGAATATATCTCAGTACTCCCAAAACTGAAAAGTTTTCTGAAGACGGCGAAAATGACCGTCTTAGATATGGTTTATCATCAATGCAAGGCTGGCGTGCATCAATGGAAGATGCTCATGCTGCATATACTGATCTGGACAAGTCTACTTCATTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTAAGTTTCTTCACCAACAGATGCTAAAAAATGAAGCATACTTAGCTGGAGATATAGGAACCTCTCTTCAACAAGCTTTTCTAAGAATGGATGAGATGATGCGTGGTCAAAGAGGATGGAGGGAGCTATCAATCTTGGGAGATAAGATAAACAAGTTCAGTGGGATGATAGAAGGGTTGATTTGGTCTCCACGAAGCAGCAATGGTATTAACCGAGTTGATGATTGGGCCTTTGAGGAGGGACCTCATTCTGATTTTGCTGGACCAACTTCAGGAAGCACAGCCTGTGTTGCAGTTATTAGAAACAACCAAGTTGTTGTTGCAAATGCTGGTGATTCCCGTTGTGTAATATCTCGGAAGGGCCAGGCATACAATTTGTCTAGAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCATGCAGGACGAGTGAATGGCAGTTTAAACCTTGCAAGAGCTATTGGTGACATGGAATTTAAACAGAATAAGTTTCTTCCCGCTGAAAAGCAAGTTGTAACTGCCAATCCAGATATAAACACTGTTGAGCTTTGTGATGAAGATGAGTTTATGGTGTTGGCTTGTGATGGCATATGGGACTGCTTGTCAAGTCAACAATTGGTAGATTTAGTTCATGAACAACTGTGTTCGGAAACGAGACTTTCTACAGTGTGTGAAAGAGTACTTGACCGGTGTTTGGCACCATCAACTGCTGGTGGCGAAGGATGTGATAACATGACCATGATCTTGGTGCAGTTCAAAAAACCTGCTCAGTCCAGTGCACCTGCAGAAGAGCAATCATCATCAAACGAACCAGCTGAATCACATGTTGAACCAAAAGTGGAAAGAAACGAAGTTTAG 1089 0.4187 MGIYLSTPKTEKFSEDGENDRLRYGLSSMQGWRASMEDAHAAYTDLDKSTSFFGVYDGHGGKVVAKFCAKFLHQQMLKNEAYLAGDIGTSLQQAFLRMDEMMRGQRGWRELSILGDKINKFSGMIEGLIWSPRSSNGINRVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQVVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQVVTANPDINTVELCDEDEFMVLACDGIWDCLSSQQLVDLVHEQLCSETRLSTVCERVLDRCLAPSTAGGEGCDNMTMILVQFKKPAQSSAPAEEQSSSNEPAESHVEPKVERNEV* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3850 362 SMART PP2C_4 13 327 IPR001932 -
Mtr3g3850 362 SMART PP2C_SIG_2 28 329 IPR001932 -
Mtr3g3850 362 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Mtr3g3850 362 Gene3D - 1 330 IPR036457 -
Mtr3g3850 362 MobiDBLite consensus disorder prediction 335 350 - -
Mtr3g3850 362 CDD PP2Cc 23 329 IPR001932 -
Mtr3g3850 362 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Mtr3g3850 362 Pfam Protein phosphatase 2C 155 313 IPR001932 -
Mtr3g3850 362 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Mtr3g3850 362 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Mtr3g3850 362 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Mtr3g3850 362 MobiDBLite consensus disorder prediction 330 362 - -
Mtr3g3850 362 SUPERFAMILY PP2C-like 3 331 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3850 Mtr-Chr3 52284668 52289553 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g3850 1 341 PP2C-type Phosphatase Gene Family AT2G25070 77.126 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3850 K17499 - gmx:100787778 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3850 3 52284668 52289553 Mtr3g3850 3 52284668 52289553 ECH